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Database: UniProt
Entry: S2YMQ1_9ACTN
LinkDB: S2YMQ1_9ACTN
Original site: S2YMQ1_9ACTN 
ID   S2YMQ1_9ACTN            Unreviewed;       456 AA.
AC   S2YMQ1;
DT   18-SEP-2013, integrated into UniProtKB/TrEMBL.
DT   18-SEP-2013, sequence version 1.
DT   24-JAN-2024, entry version 31.
DE   RecName: Full=Ricin B lectin domain-containing protein {ECO:0000259|SMART:SM00458};
GN   ORFNames=HMPREF1211_05736 {ECO:0000313|EMBL:EPD58797.1};
OS   Streptomyces sp. HGB0020.
OC   Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales;
OC   Streptomycetaceae; Streptomyces.
OX   NCBI_TaxID=1078086 {ECO:0000313|EMBL:EPD58797.1, ECO:0000313|Proteomes:UP000014410};
RN   [1] {ECO:0000313|EMBL:EPD58797.1, ECO:0000313|Proteomes:UP000014410}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=HGB0020 {ECO:0000313|EMBL:EPD58797.1,
RC   ECO:0000313|Proteomes:UP000014410};
RG   The Broad Institute Genomics Platform;
RA   Earl A., Ward D., Feldgarden M., Gevers D., Schmidt T.M., Dai D., Dover J.,
RA   Kim K., Walker B., Young S., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA   Abouelleil A., Allen A.W., Alvarado L., Arachchi H.M., Berlin A.M.,
RA   Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA   Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C.,
RA   Pearson M., Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sisk P.,
RA   Sykes S., Wortman J., Nusbaum C., Birren B.;
RT   "The Genome Sequence of Streptomyces sp. HGB0020.";
RL   Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:EPD58797.1}.
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DR   EMBL; AGER01000023; EPD58797.1; -; Genomic_DNA.
DR   RefSeq; WP_016435638.1; NZ_KE150428.1.
DR   AlphaFoldDB; S2YMQ1; -.
DR   STRING; 1078086.HMPREF1211_05736; -.
DR   PATRIC; fig|1078086.3.peg.5789; -.
DR   HOGENOM; CLU_045395_0_0_11; -.
DR   OrthoDB; 3444343at2; -.
DR   Proteomes; UP000014410; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR   CDD; cd00161; RICIN; 1.
DR   Gene3D; 2.80.10.50; -; 1.
DR   InterPro; IPR035992; Ricin_B-like_lectins.
DR   InterPro; IPR000772; Ricin_B_lectin.
DR   Pfam; PF00652; Ricin_B_lectin; 1.
DR   SMART; SM00458; RICIN; 1.
DR   SUPFAM; SSF50370; Ricin B-like lectins; 1.
DR   PROSITE; PS50231; RICIN_B_LECTIN; 1.
PE   4: Predicted;
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000014410};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM        220..242
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          325..455
FT                   /note="Ricin B lectin"
FT                   /evidence="ECO:0000259|SMART:SM00458"
FT   REGION          257..326
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        275..292
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   456 AA;  48276 MW;  9A0F6EE319AD8AA7 CRC64;
     MTLWTSLEPA SATVDPGGST RVRLRLRNTG DVVDEYRFEP VGSIAPWTTV EPQTLRLYPG
     TTGTVDLTFA PPRTPDAVAG PNPYAVRITP TEHPEATTVP EGNLTITPFT EVRAELVPPT
     VKGRFRGRPR LAVDNLGNTK LTASISGNDN GDQLSYEIFP SNVQIEPGRA AFVRTTLKPR
     QIMWFGGKEQ RPYTLNVVRS GANPLPVEGT YVQRGFLPRW LATFLGVFTA LAITFVMLWI
     AYKPAVNTGA TEKQVEAANT LAPAPSPSPA LSTAPTPSST PSAPTGGDTD DDTDTGGSGG
     GGGGGGAPAP AKKNTAKPEK SATPVPGQLI IGQGSDRCID VTDAQNGVGK DGKQLQIWDC
     AGSANQKWDF RGDGTVRSLG MCMDVAWGSK EDGAHIQLAR CSGNPAQQFV LSQAGDLVNP
     QADKCVDVVD NKTGNGAKLQ LWTCAGTPNQ KWRVQD
//
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