ID S2YMQ1_9ACTN Unreviewed; 456 AA.
AC S2YMQ1;
DT 18-SEP-2013, integrated into UniProtKB/TrEMBL.
DT 18-SEP-2013, sequence version 1.
DT 24-JAN-2024, entry version 31.
DE RecName: Full=Ricin B lectin domain-containing protein {ECO:0000259|SMART:SM00458};
GN ORFNames=HMPREF1211_05736 {ECO:0000313|EMBL:EPD58797.1};
OS Streptomyces sp. HGB0020.
OC Bacteria; Actinomycetota; Actinomycetes; Kitasatosporales;
OC Streptomycetaceae; Streptomyces.
OX NCBI_TaxID=1078086 {ECO:0000313|EMBL:EPD58797.1, ECO:0000313|Proteomes:UP000014410};
RN [1] {ECO:0000313|EMBL:EPD58797.1, ECO:0000313|Proteomes:UP000014410}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=HGB0020 {ECO:0000313|EMBL:EPD58797.1,
RC ECO:0000313|Proteomes:UP000014410};
RG The Broad Institute Genomics Platform;
RA Earl A., Ward D., Feldgarden M., Gevers D., Schmidt T.M., Dai D., Dover J.,
RA Kim K., Walker B., Young S., Zeng Q., Gargeya S., Fitzgerald M., Haas B.,
RA Abouelleil A., Allen A.W., Alvarado L., Arachchi H.M., Berlin A.M.,
RA Chapman S.B., Gainer-Dewar J., Goldberg J., Griggs A., Gujja S., Hansen M.,
RA Howarth C., Imamovic A., Ireland A., Larimer J., McCowan C., Murphy C.,
RA Pearson M., Poon T.W., Priest M., Roberts A., Saif S., Shea T., Sisk P.,
RA Sykes S., Wortman J., Nusbaum C., Birren B.;
RT "The Genome Sequence of Streptomyces sp. HGB0020.";
RL Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EPD58797.1}.
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DR EMBL; AGER01000023; EPD58797.1; -; Genomic_DNA.
DR RefSeq; WP_016435638.1; NZ_KE150428.1.
DR AlphaFoldDB; S2YMQ1; -.
DR STRING; 1078086.HMPREF1211_05736; -.
DR PATRIC; fig|1078086.3.peg.5789; -.
DR HOGENOM; CLU_045395_0_0_11; -.
DR OrthoDB; 3444343at2; -.
DR Proteomes; UP000014410; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR CDD; cd00161; RICIN; 1.
DR Gene3D; 2.80.10.50; -; 1.
DR InterPro; IPR035992; Ricin_B-like_lectins.
DR InterPro; IPR000772; Ricin_B_lectin.
DR Pfam; PF00652; Ricin_B_lectin; 1.
DR SMART; SM00458; RICIN; 1.
DR SUPFAM; SSF50370; Ricin B-like lectins; 1.
DR PROSITE; PS50231; RICIN_B_LECTIN; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000014410};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 220..242
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 325..455
FT /note="Ricin B lectin"
FT /evidence="ECO:0000259|SMART:SM00458"
FT REGION 257..326
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 275..292
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 456 AA; 48276 MW; 9A0F6EE319AD8AA7 CRC64;
MTLWTSLEPA SATVDPGGST RVRLRLRNTG DVVDEYRFEP VGSIAPWTTV EPQTLRLYPG
TTGTVDLTFA PPRTPDAVAG PNPYAVRITP TEHPEATTVP EGNLTITPFT EVRAELVPPT
VKGRFRGRPR LAVDNLGNTK LTASISGNDN GDQLSYEIFP SNVQIEPGRA AFVRTTLKPR
QIMWFGGKEQ RPYTLNVVRS GANPLPVEGT YVQRGFLPRW LATFLGVFTA LAITFVMLWI
AYKPAVNTGA TEKQVEAANT LAPAPSPSPA LSTAPTPSST PSAPTGGDTD DDTDTGGSGG
GGGGGGAPAP AKKNTAKPEK SATPVPGQLI IGQGSDRCID VTDAQNGVGK DGKQLQIWDC
AGSANQKWDF RGDGTVRSLG MCMDVAWGSK EDGAHIQLAR CSGNPAQQFV LSQAGDLVNP
QADKCVDVVD NKTGNGAKLQ LWTCAGTPNQ KWRVQD
//