ID S4H1C0_GARVA Unreviewed; 252 AA.
AC S4H1C0;
DT 18-SEP-2013, integrated into UniProtKB/TrEMBL.
DT 18-SEP-2013, sequence version 1.
DT 24-JAN-2024, entry version 36.
DE RecName: Full=Probable transcriptional regulatory protein HMPREF1573_00505 {ECO:0000256|HAMAP-Rule:MF_00693};
GN ORFNames=HMPREF1573_00505 {ECO:0000313|EMBL:EPI57071.1};
OS Gardnerella vaginalis JCP7276.
OC Bacteria; Actinomycetota; Actinomycetes; Bifidobacteriales;
OC Bifidobacteriaceae; Gardnerella.
OX NCBI_TaxID=1261058 {ECO:0000313|EMBL:EPI57071.1, ECO:0000313|Proteomes:UP000014591};
RN [1] {ECO:0000313|EMBL:EPI57071.1, ECO:0000313|Proteomes:UP000014591}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JCP7276 {ECO:0000313|EMBL:EPI57071.1,
RC ECO:0000313|Proteomes:UP000014591};
RA Weinstock G., Sodergren E., Lobos E.A., Fulton L., Fulton R., Courtney L.,
RA Fronick C., O'Laughlin M., Godfrey J., Wilson R.M., Miner T., Farmer C.,
RA Delehaunty K., Cordes M., Minx P., Tomlinson C., Chen J., Wollam A.,
RA Pepin K.H., Bhonagiri V., Zhang X., Warren W., Mitreva M., Mardis E.R.,
RA Wilson R.K.;
RL Submitted (JUN-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000256|HAMAP-Rule:MF_00693}.
CC -!- SIMILARITY: Belongs to the TACO1 family.
CC {ECO:0000256|ARBA:ARBA00008724, ECO:0000256|HAMAP-Rule:MF_00693}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EPI57071.1}.
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DR EMBL; ATJR01000013; EPI57071.1; -; Genomic_DNA.
DR RefSeq; WP_004113651.1; NZ_KE348423.1.
DR AlphaFoldDB; S4H1C0; -.
DR GeneID; 60756416; -.
DR PATRIC; fig|1261058.4.peg.451; -.
DR HOGENOM; CLU_062974_2_2_11; -.
DR Proteomes; UP000014591; Unassembled WGS sequence.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-SubCell.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:UniProtKB-UniRule.
DR Gene3D; 1.10.10.200; -; 1.
DR Gene3D; 3.30.70.980; -; 2.
DR HAMAP; MF_00693; Transcrip_reg_TACO1; 1.
DR InterPro; IPR017856; Integrase-like_N.
DR InterPro; IPR048300; TACO1_YebC-like_2nd/3rd_dom.
DR InterPro; IPR049083; TACO1_YebC_N.
DR InterPro; IPR002876; Transcrip_reg_TACO1-like.
DR InterPro; IPR026564; Transcrip_reg_TACO1-like_dom3.
DR InterPro; IPR029072; YebC-like.
DR NCBIfam; TIGR01033; YebC/PmpR family DNA-binding transcriptional regulator; 1.
DR PANTHER; PTHR12532:SF6; TRANSCRIPTIONAL REGULATORY PROTEIN YEBC-RELATED; 1.
DR PANTHER; PTHR12532; UNCHARACTERIZED; 1.
DR Pfam; PF20772; TACO1_YebC_N; 1.
DR Pfam; PF01709; Transcrip_reg; 1.
DR SUPFAM; SSF75625; YebC-like; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490, ECO:0000256|HAMAP-Rule:MF_00693};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|HAMAP-
KW Rule:MF_00693};
KW Transcription {ECO:0000256|ARBA:ARBA00023163, ECO:0000256|HAMAP-
KW Rule:MF_00693};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015, ECO:0000256|HAMAP-
KW Rule:MF_00693}.
FT DOMAIN 5..76
FT /note="TACO1/YebC-like N-terminal"
FT /evidence="ECO:0000259|Pfam:PF20772"
FT DOMAIN 83..238
FT /note="TACO1/YebC-like second and third"
FT /evidence="ECO:0000259|Pfam:PF01709"
SQ SEQUENCE 252 AA; 27119 MW; CE261A3257FA71FF CRC64;
MSGHSKWATT KHKKAAIDAK RGKLFAKLIK NIEIAARLGG GDPDGNPTLY DAIVKAKKAS
MPADNIKRAV KRGSGEEAGG ANYEEIVYEG YAPAGVGLII ECLTDNRNRA AADVRSTLTK
GNGSLATSGS VSFNFERKGL IEVPSEGVDY SKLFDIAAEA GAEDVADDGD VYSVYTDSSD
LVTVRKALQD AGFDYDSAEI VMHPNNEVEL SFEDAQKVSR LIDNLDDLDD VQNIYSNWTA
SDEVMAQLEE AE
//