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Database: UniProt
Entry: S4SLT1_ANAPL
LinkDB: S4SLT1_ANAPL
Original site: S4SLT1_ANAPL 
ID   S4SLT1_ANAPL            Unreviewed;       951 AA.
AC   S4SLT1;
DT   16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT   16-OCT-2013, sequence version 1.
DT   24-JAN-2024, entry version 56.
DE   SubName: Full=Nucleotide-binding oligomerization domain containing 1 {ECO:0000313|EMBL:AFP44845.1};
DE   SubName: Full=Nucleotide-binding oligomerization domain-containing protein 1 {ECO:0000313|EMBL:ALE99279.1};
GN   Name=NOD1 {ECO:0000313|EMBL:AFP44845.1};
OS   Anas platyrhynchos (Mallard) (Anas boschas).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Galloanserae; Anseriformes; Anatidae;
OC   Anatinae; Anas.
OX   NCBI_TaxID=8839 {ECO:0000313|EMBL:AFP44845.1};
RN   [1] {ECO:0000313|EMBL:AFP44845.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Elfeil W.K., Abouelmaatti R.R., Sun C., Han W., Yang Y., Lei L., Liu S.,
RA   Mansour D.H., Eldemerdash M.Z., Mandour M.A., Abdien H.F., Xing Y.,
RA   Wang Y., Fawzy M.;
RT   "Studies on avian PRRs.";
RL   Submitted (APR-2012) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ALE99279.1}
RP   NUCLEOTIDE SEQUENCE.
RA   Li H., Luo R.;
RT   "Molecular cloning and functional characterization of duck nucleotide-
RT   binding oligomerization domain containing 1 (NOD1).";
RL   Submitted (APR-2015) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Basolateral cell membrane
CC       {ECO:0000256|ARBA:ARBA00004187}. Cell membrane
CC       {ECO:0000256|ARBA:ARBA00004193}; Lipid-anchor
CC       {ECO:0000256|ARBA:ARBA00004193}. Cytoplasm
CC       {ECO:0000256|ARBA:ARBA00004496}. Lateral cell membrane
CC       {ECO:0000256|ARBA:ARBA00004124}. Membrane
CC       {ECO:0000256|ARBA:ARBA00004635}; Lipid-anchor
CC       {ECO:0000256|ARBA:ARBA00004635}.
CC   -!- SIMILARITY: Belongs to the NOD1-NOD2 family.
CC       {ECO:0000256|ARBA:ARBA00038296}.
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DR   EMBL; JQ868803; AFP44845.1; -; mRNA.
DR   EMBL; KR091070; ALE99279.1; -; mRNA.
DR   RefSeq; NP_001297310.1; NM_001310381.1.
DR   RefSeq; XP_005027138.1; XM_005027081.2.
DR   RefSeq; XP_005027139.1; XM_005027082.2.
DR   RefSeq; XP_005027140.1; XM_005027083.2.
DR   RefSeq; XP_005027141.1; XM_005027084.2.
DR   RefSeq; XP_012961944.1; XM_013106490.1.
DR   RefSeq; XP_012961945.1; XM_013106491.1.
DR   AlphaFoldDB; S4SLT1; -.
DR   GeneID; 101803391; -.
DR   KEGG; apla:101803391; -.
DR   CTD; 10392; -.
DR   HOGENOM; CLU_011291_1_0_1; -.
DR   OMA; AHWGMEK; -.
DR   OrthoDB; 3087860at2759; -.
DR   GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR   GO; GO:0045087; P:innate immune response; IEA:UniProtKB-KW.
DR   GO; GO:0042981; P:regulation of apoptotic process; IEA:InterPro.
DR   CDD; cd08324; CARD_NOD1_CARD4; 1.
DR   Gene3D; 1.10.533.10; Death Domain, Fas; 1.
DR   Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR   Gene3D; 3.80.10.10; Ribonuclease Inhibitor; 2.
DR   InterPro; IPR001315; CARD.
DR   InterPro; IPR011029; DEATH-like_dom_sf.
DR   InterPro; IPR001611; Leu-rich_rpt.
DR   InterPro; IPR032675; LRR_dom_sf.
DR   InterPro; IPR007111; NACHT_NTPase.
DR   InterPro; IPR041267; NLRP_HD2.
DR   InterPro; IPR041075; NOD2_WH.
DR   InterPro; IPR027417; P-loop_NTPase.
DR   PANTHER; PTHR24106:SF276; LEUCINE RICH REPEAT FAMILY PROTEIN; 1.
DR   PANTHER; PTHR24106; NACHT, LRR AND CARD DOMAINS-CONTAINING; 1.
DR   Pfam; PF00619; CARD; 1.
DR   Pfam; PF13516; LRR_6; 3.
DR   Pfam; PF05729; NACHT; 1.
DR   Pfam; PF17776; NLRC4_HD2; 1.
DR   Pfam; PF17779; NOD2_WH; 1.
DR   SMART; SM00368; LRR_RI; 7.
DR   SUPFAM; SSF47986; DEATH domain; 1.
DR   SUPFAM; SSF52047; RNI-like; 1.
DR   PROSITE; PS50209; CARD; 1.
DR   PROSITE; PS50837; NACHT; 1.
PE   2: Evidence at transcript level;
KW   Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW   Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW   Immunity {ECO:0000256|ARBA:ARBA00022859};
KW   Innate immunity {ECO:0000256|ARBA:ARBA00022588};
KW   Lipoprotein {ECO:0000256|ARBA:ARBA00023288};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136};
KW   Palmitate {ECO:0000256|ARBA:ARBA00023139};
KW   Ubl conjugation {ECO:0000256|ARBA:ARBA00022843}.
FT   DOMAIN          27..97
FT                   /note="CARD"
FT                   /evidence="ECO:0000259|PROSITE:PS50209"
FT   DOMAIN          201..402
FT                   /note="NACHT"
FT                   /evidence="ECO:0000259|PROSITE:PS50837"
SQ   SEQUENCE   951 AA;  108685 MW;  35CE51D8531B87E0 CRC64;
     MEGQLCANLE ISLEKPPGAS PPSCIALLKI YRELLVSKIR NTQCLIDNLL YNEYFSTEDA
     EIVVQFPTQA DKVRKILDLV QSKGEEVSEY FIRVLQKVTD AYYELQPWLD EIAYEPSENI
     CSRPVVNTDP VSRYCQKLRY ELGRDSKFVM SYAQREEMLL EETYSNSVME LVSFTNESLG
     EVCQLEALFD DAVGLINEDG ETIYVFGDAG IGKSILLQKI QSLWARKQLD IGAKFFFRFR
     CRMFSCFKED EAVCLKDLLF KYNCYPDQDP AEVFRHILQF PHTVLFTFDG FDEIYSNFDL
     SSVPEMCSPD EPTHPLVLLV SLLRGKLLKG SKKVLTARTG TEIQRNIIRK KVLLRGFSSS
     NLKEYTAMFF KDEGQRALVL NQLEANPNLC SLCSVPLFCW IIFKCYEHFR SMYDSHELPD
     CSVTLTDVFL LMIEVHLNRS LKTSLLKSNT RSQAEMFKAR KETLLALGKI AYRGMGNSFF
     IFEQEEVTAA NISEEDLQLG FLRTVKGYTG CDSQSTYEFL HLTLQSFFTA LFLVIEERVG
     TKEILQFFNE CSSTETAQPT CLHIPWLKKH LAGEDPFRNN EHFHFTNLFL CGLLSRSKQK
     LFRHLVLPAV IKRKRKTLIT YLGESMKSHL KGLTRSRLLN YNQIQVQPNF VWMLRCLYET
     QSEKVGKLAA KRMHANYIKL TYCNAYSADC SAISFVVHHL QKRLALDLDN NNINDYGIKQ
     LLPCFSKLAV IRLSVNQITD HGVRILYEEL SKYKIVTFLG LYNNQITDVG AKYVAKLIEE
     CSSLEYVKIG ANKITSEGGK CLAQAIQKSK TMFEIGMWGN HVGDEGAKAF AEALRNHPTL
     TNVSLAFNGI TSEGGKSIAE AMQHNDSVKI FWLTKNELDD EAAMSFAEML KVNKKLVHLW
     LIQNQITARG VKYLSEALKE NTAIKEVCLN GNLISQEEAK AFENEERIIC F
//
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