ID S5E356_9ENTO Unreviewed; 134 AA.
AC S5E356;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE RecName: Full=Genome polyprotein {ECO:0000256|ARBA:ARBA00020107};
DE Flags: Fragment;
OS Human rhinovirus sp.
OC Viruses; Riboviria; Orthornavirae; Pisuviricota; Pisoniviricetes;
OC Picornavirales; Picornaviridae; Ensavirinae; Enterovirus.
OX NCBI_TaxID=169066 {ECO:0000313|EMBL:AGQ22065.1};
RN [1] {ECO:0000313|EMBL:AGQ22065.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=KC0808_P064 {ECO:0000313|EMBL:AGQ22065.1};
RX PubMed=26231720; DOI=10.1016/j.meegid.2015.07.030;
RA Naughtin M., Rith S., Sentilhes A.C., Vong S., Joffret M.L., Cornillot E.,
RA Deubel V., Delpeyroux F., Frutos R., Buchy P.;
RT "Genetic diversity of human rhinoviruses in Cambodia during a three-year
RT period reveals novel genetic types.";
RL Infect. Genet. Evol. 35:42-49(2015).
CC -!- SUBUNIT: Interacts with capsid protein VP1 and capsid protein VP3 to
CC form heterotrimeric protomers. {ECO:0000256|ARBA:ARBA00011474}.
CC -!- SIMILARITY: Belongs to the picornaviruses polyprotein family.
CC {ECO:0000256|ARBA:ARBA00008303}.
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DR EMBL; KF034074; AGQ22065.1; -; Genomic_RNA.
DR GO; GO:0019028; C:viral capsid; IEA:InterPro.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR GO; GO:0044694; P:pore-mediated entry of viral genome into host cell; IEA:UniProtKB-KW.
DR GO; GO:0039657; P:suppression by virus of host gene expression; IEA:UniProtKB-KW.
DR GO; GO:0019062; P:virion attachment to host cell; IEA:UniProtKB-KW.
DR Gene3D; 2.60.120.20; -; 1.
DR Gene3D; 4.10.80.370; -; 1.
DR InterPro; IPR003138; Pico_P1A.
DR InterPro; IPR001676; Picornavirus_capsid.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF02226; Pico_P1A; 1.
DR Pfam; PF00073; Rhv; 1.
DR SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
PE 3: Inferred from homology;
KW Capsid protein {ECO:0000256|ARBA:ARBA00022561};
KW Eukaryotic host gene expression shutoff by virus
KW {ECO:0000256|ARBA:ARBA00023247};
KW Eukaryotic host translation shutoff by virus
KW {ECO:0000256|ARBA:ARBA00022809};
KW Host gene expression shutoff by virus {ECO:0000256|ARBA:ARBA00022995};
KW Host-virus interaction {ECO:0000256|ARBA:ARBA00022581};
KW Lipoprotein {ECO:0000256|ARBA:ARBA00023288};
KW Magnesium {ECO:0000256|ARBA:ARBA00022842};
KW Myristate {ECO:0000256|ARBA:ARBA00022707};
KW Pore-mediated penetration of viral genome into host cell
KW {ECO:0000256|ARBA:ARBA00023255};
KW Viral attachment to host cell {ECO:0000256|ARBA:ARBA00022804};
KW Viral penetration into host cytoplasm {ECO:0000256|ARBA:ARBA00022595};
KW Virion {ECO:0000256|ARBA:ARBA00022561};
KW Virus entry into host cell {ECO:0000256|ARBA:ARBA00023296}.
FT DOMAIN 87..134
FT /note="Picornavirus capsid"
FT /evidence="ECO:0000259|Pfam:PF00073"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AGQ22065.1"
FT NON_TER 134
FT /evidence="ECO:0000313|EMBL:AGQ22065.1"
SQ SEQUENCE 134 AA; 14792 MW; CDF3FDA70529E18B CRC64;
IEKIRAHSTQ NAVSNGSSLN YFNINYFKDA ASSGASRLDF SQDPSKFTDP VKDVLMKDIP
TLQSPSVEAC GYSDRIIQIT RGNSTITSQD IANAVVGYGV WPQYLPPDDA SAIDKPTHPD
ISSNRFYTLE SKEW
//