GenomeNet

Database: UniProt
Entry: S5G5Y5_BATMJ
LinkDB: S5G5Y5_BATMJ
Original site: S5G5Y5_BATMJ 
ID   S5G5Y5_BATMJ            Unreviewed;       184 AA.
AC   S5G5Y5;
DT   16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT   16-OCT-2013, sequence version 1.
DT   22-FEB-2023, entry version 26.
DE   SubName: Full=Bromodomain PHD finger transcription factor {ECO:0000313|EMBL:AGQ56660.1};
DE   Flags: Fragment;
GN   Name=BPTF {ECO:0000313|EMBL:AGQ56660.1};
OS   Batrachoseps major (garden slender salamander).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC   Batrachia; Caudata; Salamandroidea; Plethodontidae; Hemidactyliinae;
OC   Batrachoseps.
OX   NCBI_TaxID=294360 {ECO:0000313|EMBL:AGQ56660.1};
RN   [1] {ECO:0000313|EMBL:AGQ56660.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=23827877; DOI=10.1093/molbev/mst122;
RA   Shen X.X., Liang D., Feng Y.J., Chen M.Y., Zhang P.;
RT   "A versatile and highly efficient toolkit including 102 nuclear markers for
RT   vertebrate phylogenomics, tested by resolving the higher level
RT   relationships of the caudata.";
RL   Mol. Biol. Evol. 30:2235-2248(2013).
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; KC165057; AGQ56660.1; -; Genomic_DNA.
DR   AlphaFoldDB; S5G5Y5; -.
DR   GO; GO:0016589; C:NURF complex; IEA:InterPro.
DR   GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR   GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR   CDD; cd15559; PHD1_BPTF; 1.
DR   Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR   InterPro; IPR038028; BPTF.
DR   InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR   InterPro; IPR011011; Znf_FYVE_PHD.
DR   InterPro; IPR001965; Znf_PHD.
DR   InterPro; IPR019787; Znf_PHD-finger.
DR   InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR   PANTHER; PTHR45975; NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF; 1.
DR   PANTHER; PTHR45975:SF2; NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF; 1.
DR   Pfam; PF00628; PHD; 1.
DR   SMART; SM00249; PHD; 1.
DR   SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR   PROSITE; PS01359; ZF_PHD_1; 1.
DR   PROSITE; PS50016; ZF_PHD_2; 1.
PE   4: Predicted;
KW   Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW   Zinc {ECO:0000256|ARBA:ARBA00022833};
KW   Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW   ProRule:PRU00146}.
FT   DOMAIN          106..153
FT                   /note="PHD-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50016"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:AGQ56660.1"
FT   NON_TER         184
FT                   /evidence="ECO:0000313|EMBL:AGQ56660.1"
SQ   SEQUENCE   184 AA;  21380 MW;  9CBC5B1FA0DE7AB9 CRC64;
     ETHIALLKAV LREEDISNTT FGPADIKDSV NSTLYFIDGM TWPEIVRVYC ESDVEYHHVL
     PFQEMEDYPY GPIYSKIKVL HFLVDQFLTT NIAREELMSE GVIQYDDHCR VCHKLGDLLC
     CETCSAVYHL ECVKPPLEEV PEDEWQCEVC VAHKVPGVYD CVAEIQKNKP YIRHEPIGHD
     RHRR
//
DBGET integrated database retrieval system