ID S5G5Y5_BATMJ Unreviewed; 184 AA.
AC S5G5Y5;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 22-FEB-2023, entry version 26.
DE SubName: Full=Bromodomain PHD finger transcription factor {ECO:0000313|EMBL:AGQ56660.1};
DE Flags: Fragment;
GN Name=BPTF {ECO:0000313|EMBL:AGQ56660.1};
OS Batrachoseps major (garden slender salamander).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia;
OC Batrachia; Caudata; Salamandroidea; Plethodontidae; Hemidactyliinae;
OC Batrachoseps.
OX NCBI_TaxID=294360 {ECO:0000313|EMBL:AGQ56660.1};
RN [1] {ECO:0000313|EMBL:AGQ56660.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=23827877; DOI=10.1093/molbev/mst122;
RA Shen X.X., Liang D., Feng Y.J., Chen M.Y., Zhang P.;
RT "A versatile and highly efficient toolkit including 102 nuclear markers for
RT vertebrate phylogenomics, tested by resolving the higher level
RT relationships of the caudata.";
RL Mol. Biol. Evol. 30:2235-2248(2013).
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DR EMBL; KC165057; AGQ56660.1; -; Genomic_DNA.
DR AlphaFoldDB; S5G5Y5; -.
DR GO; GO:0016589; C:NURF complex; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006357; P:regulation of transcription by RNA polymerase II; IEA:InterPro.
DR CDD; cd15559; PHD1_BPTF; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR038028; BPTF.
DR InterPro; IPR019786; Zinc_finger_PHD-type_CS.
DR InterPro; IPR011011; Znf_FYVE_PHD.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR019787; Znf_PHD-finger.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR45975; NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF; 1.
DR PANTHER; PTHR45975:SF2; NUCLEOSOME-REMODELING FACTOR SUBUNIT BPTF; 1.
DR Pfam; PF00628; PHD; 1.
DR SMART; SM00249; PHD; 1.
DR SUPFAM; SSF57903; FYVE/PHD zinc finger; 1.
DR PROSITE; PS01359; ZF_PHD_1; 1.
DR PROSITE; PS50016; ZF_PHD_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00146}.
FT DOMAIN 106..153
FT /note="PHD-type"
FT /evidence="ECO:0000259|PROSITE:PS50016"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AGQ56660.1"
FT NON_TER 184
FT /evidence="ECO:0000313|EMBL:AGQ56660.1"
SQ SEQUENCE 184 AA; 21380 MW; 9CBC5B1FA0DE7AB9 CRC64;
ETHIALLKAV LREEDISNTT FGPADIKDSV NSTLYFIDGM TWPEIVRVYC ESDVEYHHVL
PFQEMEDYPY GPIYSKIKVL HFLVDQFLTT NIAREELMSE GVIQYDDHCR VCHKLGDLLC
CETCSAVYHL ECVKPPLEEV PEDEWQCEVC VAHKVPGVYD CVAEIQKNKP YIRHEPIGHD
RHRR
//