ID S5SVD0_9CORY Unreviewed; 400 AA.
AC S5SVD0;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 24-JAN-2024, entry version 47.
DE SubName: Full=Ribonuclease D protein {ECO:0000313|EMBL:AGS34977.1};
GN ORFNames=B841_07520 {ECO:0000313|EMBL:AGS34977.1};
OS Corynebacterium maris DSM 45190.
OC Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales;
OC Corynebacteriaceae; Corynebacterium.
OX NCBI_TaxID=1224163 {ECO:0000313|EMBL:AGS34977.1, ECO:0000313|Proteomes:UP000015388};
RN [1] {ECO:0000313|EMBL:AGS34977.1, ECO:0000313|Proteomes:UP000015388}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Coryn-1 {ECO:0000313|Proteomes:UP000015388};
RA Schaffert L., Albersmeier A., Kalinowski J., Ruckert C.;
RT "The complete genome sequence of Corynebacterium maris Coryn-1 (=DSM
RT 45190).";
RL Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; CP003924; AGS34977.1; -; Genomic_DNA.
DR RefSeq; WP_020934910.1; NC_021915.1.
DR AlphaFoldDB; S5SVD0; -.
DR STRING; 1224163.B841_07520; -.
DR KEGG; cmd:B841_07520; -.
DR PATRIC; fig|1224163.3.peg.1511; -.
DR eggNOG; COG0349; Bacteria.
DR HOGENOM; CLU_042387_3_0_11; -.
DR OrthoDB; 144122at2; -.
DR Proteomes; UP000015388; Chromosome.
DR GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR CDD; cd06142; RNaseD_exo; 1.
DR Gene3D; 1.10.150.80; HRDC domain; 2.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR InterPro; IPR041605; Exo_C.
DR InterPro; IPR010997; HRDC-like_sf.
DR InterPro; IPR002121; HRDC_dom.
DR InterPro; IPR044876; HRDC_dom_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR PANTHER; PTHR47649; RIBONUCLEASE D; 1.
DR PANTHER; PTHR47649:SF1; RIBONUCLEASE D; 1.
DR Pfam; PF01612; DNA_pol_A_exo1; 1.
DR Pfam; PF18305; DNA_pol_A_exoN; 1.
DR Pfam; PF00570; HRDC; 1.
DR SMART; SM00474; 35EXOc; 1.
DR SMART; SM00341; HRDC; 1.
DR SUPFAM; SSF47819; HRDC-like; 1.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR PROSITE; PS50967; HRDC; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000015388}.
FT DOMAIN 220..302
FT /note="HRDC"
FT /evidence="ECO:0000259|PROSITE:PS50967"
SQ SEQUENCE 400 AA; 44592 MW; B9178A85E74BCA83 CRC64;
MTTDLTWPRE GLPELVDTPA GFARAAAALA AGIGPVAIDT ERASGFRYDD RAFVLQLRRK
GTGTLLIDPE GHRDDVTAAF AGVLNAADWV LHAAASDLPS LAMLGFHPAR LFDTELAGRL
AGLEHVNLAA MIEHFFDFRL AKGHGAEDWS QRPLPEKWLA YAALDVELLL DLAEAMTELL
DGQGKLEFAE QEFDHLVDAH SLAPEPTTWR DVKGVGTLRR PEQLNVARHL WRAREDIAVA
EDRAVSKILP NKVLVEIART LPTDRRDLSS VRGFPARRNS ATRFWFTELT HARHVARDHW
PAPLPRRESV PSKPLWQREF PDSWATYETV REQIGELSEA TGIPTENLLR PAIVREAVWA
GRETGEIISP TQLGEWLRSR DARPWQIQLV GPLLTDALAS
//