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Database: UniProt
Entry: S5SVD0_9CORY
LinkDB: S5SVD0_9CORY
Original site: S5SVD0_9CORY 
ID   S5SVD0_9CORY            Unreviewed;       400 AA.
AC   S5SVD0;
DT   16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT   16-OCT-2013, sequence version 1.
DT   24-JAN-2024, entry version 47.
DE   SubName: Full=Ribonuclease D protein {ECO:0000313|EMBL:AGS34977.1};
GN   ORFNames=B841_07520 {ECO:0000313|EMBL:AGS34977.1};
OS   Corynebacterium maris DSM 45190.
OC   Bacteria; Actinomycetota; Actinomycetes; Mycobacteriales;
OC   Corynebacteriaceae; Corynebacterium.
OX   NCBI_TaxID=1224163 {ECO:0000313|EMBL:AGS34977.1, ECO:0000313|Proteomes:UP000015388};
RN   [1] {ECO:0000313|EMBL:AGS34977.1, ECO:0000313|Proteomes:UP000015388}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=Coryn-1 {ECO:0000313|Proteomes:UP000015388};
RA   Schaffert L., Albersmeier A., Kalinowski J., Ruckert C.;
RT   "The complete genome sequence of Corynebacterium maris Coryn-1 (=DSM
RT   45190).";
RL   Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; CP003924; AGS34977.1; -; Genomic_DNA.
DR   RefSeq; WP_020934910.1; NC_021915.1.
DR   AlphaFoldDB; S5SVD0; -.
DR   STRING; 1224163.B841_07520; -.
DR   KEGG; cmd:B841_07520; -.
DR   PATRIC; fig|1224163.3.peg.1511; -.
DR   eggNOG; COG0349; Bacteria.
DR   HOGENOM; CLU_042387_3_0_11; -.
DR   OrthoDB; 144122at2; -.
DR   Proteomes; UP000015388; Chromosome.
DR   GO; GO:0008408; F:3'-5' exonuclease activity; IEA:InterPro.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0000166; F:nucleotide binding; IEA:InterPro.
DR   GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:InterPro.
DR   CDD; cd06142; RNaseD_exo; 1.
DR   Gene3D; 1.10.150.80; HRDC domain; 2.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   InterPro; IPR002562; 3'-5'_exonuclease_dom.
DR   InterPro; IPR041605; Exo_C.
DR   InterPro; IPR010997; HRDC-like_sf.
DR   InterPro; IPR002121; HRDC_dom.
DR   InterPro; IPR044876; HRDC_dom_sf.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   PANTHER; PTHR47649; RIBONUCLEASE D; 1.
DR   PANTHER; PTHR47649:SF1; RIBONUCLEASE D; 1.
DR   Pfam; PF01612; DNA_pol_A_exo1; 1.
DR   Pfam; PF18305; DNA_pol_A_exoN; 1.
DR   Pfam; PF00570; HRDC; 1.
DR   SMART; SM00474; 35EXOc; 1.
DR   SMART; SM00341; HRDC; 1.
DR   SUPFAM; SSF47819; HRDC-like; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50967; HRDC; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000015388}.
FT   DOMAIN          220..302
FT                   /note="HRDC"
FT                   /evidence="ECO:0000259|PROSITE:PS50967"
SQ   SEQUENCE   400 AA;  44592 MW;  B9178A85E74BCA83 CRC64;
     MTTDLTWPRE GLPELVDTPA GFARAAAALA AGIGPVAIDT ERASGFRYDD RAFVLQLRRK
     GTGTLLIDPE GHRDDVTAAF AGVLNAADWV LHAAASDLPS LAMLGFHPAR LFDTELAGRL
     AGLEHVNLAA MIEHFFDFRL AKGHGAEDWS QRPLPEKWLA YAALDVELLL DLAEAMTELL
     DGQGKLEFAE QEFDHLVDAH SLAPEPTTWR DVKGVGTLRR PEQLNVARHL WRAREDIAVA
     EDRAVSKILP NKVLVEIART LPTDRRDLSS VRGFPARRNS ATRFWFTELT HARHVARDHW
     PAPLPRRESV PSKPLWQREF PDSWATYETV REQIGELSEA TGIPTENLLR PAIVREAVWA
     GRETGEIISP TQLGEWLRSR DARPWQIQLV GPLLTDALAS
//
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