UniProt: S5XPZ4

Database: UniProt
Entry: S5XPZ4_LISMN

LinkDB:  S5XPZ4_LISMN 
Original site:  S5XPZ4_LISMN

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Ontology (2)   
   GO (2)   
Protein sequence (1)   
   RefSeq(pep) (1)   
DNA sequence (17)   
   EMBL (17)   
Protein domain (11)   
   InterPro (7)   
   Pfam (3)   
   PROSITE (1)   
Literature (1)   
   PubMed (1)   
All databases (32)   

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ID   S5XPZ4_LISMN            Unreviewed;       478 AA.
AC   S5XPZ4;
DT   16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT   16-OCT-2013, sequence version 1.
DT   27-MAR-2024, entry version 73.
DE   SubName: Full=Transposase {ECO:0000313|EMBL:ASD77413.1, ECO:0000313|EMBL:EAK9771835.1};
DE   SubName: Full=Putative transposase {ECO:0000313|EMBL:AGU67309.1};
GN   ORFNames=AP104_13505 {ECO:0000313|EMBL:EAC5950404.1}, APD94_14435
GN   {ECO:0000313|EMBL:EAE1097166.1}, ARX15_15875
GN   {ECO:0000313|EMBL:ASD77413.1}, B4X68_13840
GN   {ECO:0000313|EMBL:EAC3883090.1}, B6112_13000
GN   {ECO:0000313|EMBL:EAG3501893.1}, BCZ21_14530
GN   {ECO:0000313|EMBL:EAG2088482.1}, DQ70_14660
GN   {ECO:0000313|EMBL:EAC7481930.1}, EXZ73_15690
GN   {ECO:0000313|EMBL:EAD5775716.1}, F6436_11930
GN   {ECO:0000313|EMBL:ECY6545042.1}, F6436_16510
GN   {ECO:0000313|EMBL:ECY6545905.1}, FDP88_14645
GN   {ECO:0000313|EMBL:EAK9771835.1}, G3O21_003086
GN   {ECO:0000313|EMBL:EDP8515619.1}, GYO01_13690
GN   {ECO:0000313|EMBL:HAB7365165.1}, GYP27_13850
GN   {ECO:0000313|EMBL:HAB7723069.1}, GYS09_13585
GN   {ECO:0000313|EMBL:HAB8558320.1}, GZK27_13955
GN   {ECO:0000313|EMBL:HAC3056607.1};
OS   Listeria monocytogenes.
OG   Plasmid pCFSAN021445 {ECO:0000313|EMBL:ASD77413.1},
OG   Plasmid pcfsan021445 {ECO:0000313|Proteomes:UP000197062}, and
OG   Plasmid unnamed {ECO:0000313|EMBL:AGU67309.1}.
OC   Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
OX   NCBI_TaxID=1639 {ECO:0000313|EMBL:AGU67309.1};
RN   [1] {ECO:0000313|EMBL:AGU67309.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=11GZL18 {ECO:0000313|EMBL:AGU67309.1};
RC   PLASMID=unnamed {ECO:0000313|EMBL:AGU67309.1};
RA   Xu D., Yan H., Shi L., He J.;
RL   Submitted (APR-2013) to the EMBL/GenBank/DDBJ databases.
RN   [2] {ECO:0000313|EMBL:ASD77413.1, ECO:0000313|Proteomes:UP000197062}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=FDA00006907 {ECO:0000313|EMBL:ASD77413.1,
RC   ECO:0000313|Proteomes:UP000197062};
RC   PLASMID=pcfsan021445 {ECO:0000313|Proteomes:UP000197062}, and
RC   pCFSAN021445 {ECO:0000313|EMBL:ASD77413.1};
RA   Hoffmann M., Sanchez M., Timme R., Chen Y.;
RT   "Whole genome sequencing of cultured pathogen.";
RL   Submitted (JUN-2017) to the EMBL/GenBank/DDBJ databases.
RN   [3] {ECO:0000313|Proteomes:UP000841561, ECO:0000313|Proteomes:UP000844415}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CFIAFB20100120 {ECO:0000313|EMBL:HAB8558320.1,
RC   ECO:0000313|Proteomes:UP000844415}, CFIAFB20140010, CFIAFB20160079
RC   {ECO:0000313|EMBL:HAB7365165.1, ECO:0000313|Proteomes:UP000845014},
RC   and LiDS0115 {ECO:0000313|EMBL:HAC3056607.1,
RC   ECO:0000313|Proteomes:UP000841561};
RX   PubMed=30286803;
RA   Souvorov A., Agarwala R., Lipman D.J.;
RT   "SKESA: strategic k-mer extension for scrupulous assemblies.";
RL   Genome Biol. 19:153-153(2018).
RN   [4] {ECO:0000313|EMBL:HAB7723069.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=CFIAFB20140010 {ECO:0000313|EMBL:HAB7723069.1};
RA   Souvorov A., Agarwala R., Lipman D.J.;
RT   "SKESA: strategic k-mer extension for scrupulous assemblies.";
RL   Genome Biol. 19:0-153(2018).
RN   [5] {ECO:0000313|Proteomes:UP000337746, ECO:0000313|Proteomes:UP000355989}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=CFSAN008042 {ECO:0000313|EMBL:EAC7481930.1,
RC   ECO:0000313|Proteomes:UP000368512}, CFSAN060999
RC   {ECO:0000313|EMBL:EAC3883090.1, ECO:0000313|Proteomes:UP000356407},
RC   CFSAN061703 {ECO:0000313|EMBL:EAG3501893.1}, FDA00009539
RC   {ECO:0000313|EMBL:EAC5950404.1, ECO:0000313|Proteomes:UP000378540},
RC   FDA00015054 {ECO:0000313|EMBL:EDP8515619.1}, FDA1090798-S029-001
RC   {ECO:0000313|Proteomes:UP000478704}, FLAG-54356
RC   {ECO:0000313|EMBL:EAG2088482.1, ECO:0000313|Proteomes:UP000337746},
RC   FLAG-78586 {ECO:0000313|EMBL:EAE1097166.1,
RC   ECO:0000313|Proteomes:UP000355989}, and FSIS31901579
RC   {ECO:0000313|EMBL:EAD5775716.1, ECO:0000313|Proteomes:UP000376505};
RG   GenomeTrakr: Next Generation Sequencing Network for Food Pathogen Tracability;
RL   Submitted (JUN-2018) to the EMBL/GenBank/DDBJ databases.
RN   [6] {ECO:0000313|EMBL:EAK9771835.1, ECO:0000313|Proteomes:UP000413788}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=FLAG-50187 {ECO:0000313|EMBL:EAK9771835.1,
RC   ECO:0000313|Proteomes:UP000413788}, and FLAG-55987
RC   {ECO:0000313|EMBL:ECY6545042.1, ECO:0000313|Proteomes:UP000364988};
RG   GenomeTrakr network: Whole genome sequencing for foodborne pathogen traceback;
RL   Submitted (MAY-2019) to the EMBL/GenBank/DDBJ databases.
RN   [7] {ECO:0000313|EMBL:HAB7365165.1}
RP   NUCLEOTIDE SEQUENCE.
RC   STRAIN=CFIAFB20100120 {ECO:0000313|EMBL:HAB8558320.1}, CFIAFB20140010
RC   {ECO:0000313|EMBL:HAB7723069.1}, CFIAFB20160079
RC   {ECO:0000313|EMBL:HAB7365165.1}, and LiDS0115
RC   {ECO:0000313|EMBL:HAC3056607.1};
RG   NCBI Pathogen Detection Project;
RL   Submitted (JAN-2020) to the EMBL/GenBank/DDBJ databases.
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DR   EMBL; KC980924; AGU67309.1; -; Genomic_DNA.
DR   EMBL; CP022021; ASD77413.1; -; Genomic_DNA.
DR   EMBL; AAAICE010000011; EAC3883090.1; -; Genomic_DNA.
DR   EMBL; AAAJCR010000011; EAC5950404.1; -; Genomic_DNA.
DR   EMBL; AAAJWF010000011; EAC7481930.1; -; Genomic_DNA.
DR   EMBL; AAANYN010000046; EAD5775716.1; -; Genomic_DNA.
DR   EMBL; AAAQOE010000008; EAE1097166.1; -; Genomic_DNA.
DR   EMBL; AABAWE010000010; EAG2088482.1; -; Genomic_DNA.
DR   EMBL; AABBOD010000008; EAG3501893.1; -; Genomic_DNA.
DR   EMBL; AACKJM010000013; EAK9771835.1; -; Genomic_DNA.
DR   EMBL; AALEDS010000012; ECY6545042.1; -; Genomic_DNA.
DR   EMBL; AALEDS010000045; ECY6545905.1; -; Genomic_DNA.
DR   EMBL; AANPAU010000021; EDP8515619.1; -; Genomic_DNA.
DR   EMBL; DAAHUJ010000010; HAB7365165.1; -; Genomic_DNA.
DR   EMBL; DAAHYZ010000012; HAB7723069.1; -; Genomic_DNA.
DR   EMBL; DAAIJL010000016; HAB8558320.1; -; Genomic_DNA.
DR   EMBL; DAAKPP010000009; HAC3056607.1; -; Genomic_DNA.
DR   RefSeq; WP_003725298.1; NZ_WUDV01000008.1.
DR   PATRIC; fig|1639.1045.peg.3089; -.
DR   Proteomes; UP000197062; Plasmid pcfsan021445.
DR   Proteomes; UP000337746; Unassembled WGS sequence.
DR   Proteomes; UP000355989; Unassembled WGS sequence.
DR   Proteomes; UP000356407; Unassembled WGS sequence.
DR   Proteomes; UP000364988; Unassembled WGS sequence.
DR   Proteomes; UP000368512; Unassembled WGS sequence.
DR   Proteomes; UP000376505; Unassembled WGS sequence.
DR   Proteomes; UP000378540; Unassembled WGS sequence.
DR   Proteomes; UP000413788; Unassembled WGS sequence.
DR   Proteomes; UP000478704; Unassembled WGS sequence.
DR   Proteomes; UP000840569; Unassembled WGS sequence.
DR   Proteomes; UP000841561; Unassembled WGS sequence.
DR   Proteomes; UP000844415; Unassembled WGS sequence.
DR   Proteomes; UP000845014; Unassembled WGS sequence.
DR   GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR   GO; GO:0015074; P:DNA integration; IEA:InterPro.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR   Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR   Gene3D; 2.30.30.130; Transposase, Mu, C-terminal; 1.
DR   Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR001584; Integrase_cat-core.
DR   InterPro; IPR012337; RNaseH-like_sf.
DR   InterPro; IPR036397; RNaseH_sf.
DR   InterPro; IPR015378; Transposase-like_Mu_C.
DR   InterPro; IPR009004; Transposase_Mu_C.
DR   InterPro; IPR036388; WH-like_DNA-bd_sf.
DR   PANTHER; PTHR35004; TRANSPOSASE RV3428C-RELATED; 1.
DR   PANTHER; PTHR35004:SF6; TRANSPOSASE RV3428C-RELATED; 1.
DR   Pfam; PF13518; HTH_28; 1.
DR   Pfam; PF09299; Mu-transpos_C; 1.
DR   Pfam; PF00665; rve; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 1.
DR   SUPFAM; SSF50610; mu transposase, C-terminal domain; 1.
DR   SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR   PROSITE; PS50994; INTEGRASE; 1.
PE   4: Predicted;
KW   Coiled coil {ECO:0000256|SAM:Coils}; Plasmid {ECO:0000313|EMBL:AGU67309.1}.
FT   DOMAIN          154..339
FT                   /note="Integrase catalytic"
FT                   /evidence="ECO:0000259|PROSITE:PS50994"
FT   COILED          418..445
FT                   /evidence="ECO:0000256|SAM:Coils"
SQ   SEQUENCE   478 AA;  56092 MW;  22E55927264B8E18 CRC64;
     MSNKKILANY SEEQRLKALK KFRVLQPYLK KEIPLSKVSE ENDISTRTLR KWISNYKKSG
     LVGLITKERS DKNSMKISED LCKIIKHIYL ENKNVSITSI YRRTVSWCKE NNIQEPSYYQ
     VRKIIQLVPD KLKVLAHQGS KIYMNHYELV HIRETTAPNI IWQADHTLLD IEVLNAKGYP
     ERPWLTIIMD DYSRAITGYF IAFESPNSLR TALTLRQAIW RKDQADWPIC GIPRIFYTDH
     GSDFTSQHLE QVSADLKIEL KFSKVGVPRG RGKIERFFHT VNSMLLQDLP GYIKNRKAKS
     MLTLEEFSDI FRNWLLRIYH QKQHSTTKEK PIAMWNNYDF LPNMPNSLED LDLLLIKVKK
     ERVVHSDGIH LFGMKYVHPT LSAFVSEPVV IRYDPRDISD VRVFYKNVFL CTAVSTSFEQ
     YAIGIREIEK ERSKLKRELK RELIVSTNKV IEKLVGRQKE NSSTVKNNVS SLRRYENE
//

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