ID S6GMX1_9GAMM Unreviewed; 325 AA.
AC S6GMX1;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 24-JAN-2024, entry version 39.
DE SubName: Full=Cys regulon transcriptional activator {ECO:0000313|EMBL:EPJ47701.1};
GN ORFNames=OFPII_11130 {ECO:0000313|EMBL:EPJ47701.1};
OS Osedax symbiont Rs1.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC Oceanospirillaceae.
OX NCBI_TaxID=1330036 {ECO:0000313|EMBL:EPJ47701.1, ECO:0000313|Proteomes:UP000014822};
RN [1] {ECO:0000313|EMBL:EPJ47701.1, ECO:0000313|Proteomes:UP000014822}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Rs1 {ECO:0000313|Proteomes:UP000014822};
RA Yi H., Goffredi S.;
RT "Comparative genomics of two novel heterotrophic symbionts of deep-sea
RT Osedax worms: functional variation and environmental selection.";
RL Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EPJ47701.1}.
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; ASZJ01000056; EPJ47701.1; -; Genomic_DNA.
DR AlphaFoldDB; S6GMX1; -.
DR PATRIC; fig|1330036.3.peg.1058; -.
DR Proteomes; UP000014822; Unassembled WGS sequence.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR CDD; cd08413; PBP2_CysB_like; 1.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 2.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR037423; CysB_PBP2.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30126; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR30126:SF6; HTH-TYPE TRANSCRIPTIONAL REGULATOR CYSB-RELATED; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000014822};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 1..57
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 325 AA; 36212 MW; 2ABB6ABCADAD9DFC CRC64;
MKLQQLKYIL EVEKHDLNVS ATALSLFTSQ PGISKQIRLL EDELGVEVFS RSGKHLTRVT
PAGKAILEIA GDILQKVESI KKVSQEFCDE RKGSLSIATT HTQARYALPL AITQFIQSYP
DVSLHMQQGT PMQISEMAAN GKVDFAIATE ALSHFSDLIM MPCYRWNRSV VVPKNHPLAQ
LSELTLEALA KYSIVTYVFG FTGRSKLDDA FKQQGLEPKV VFTAVDSDVI KTYVRLNLGV
GIIASMAFDP DVDTDLVAID ASHLFESSTT QIGFRKGTFL RGYMYEFISL FAPHLTPDLV
REVMNCDNRM QVDEIFAGHA LPEMN
//