ID S6HPR4_9GAMM Unreviewed; 1007 AA.
AC S6HPR4;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE SubName: Full=M23/M37 peptidase/aminotransferase, class III {ECO:0000313|EMBL:EPJ47077.1};
GN ORFNames=OFPII_15390 {ECO:0000313|EMBL:EPJ47077.1};
OS Osedax symbiont Rs1.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Oceanospirillales;
OC Oceanospirillaceae.
OX NCBI_TaxID=1330036 {ECO:0000313|EMBL:EPJ47077.1, ECO:0000313|Proteomes:UP000014822};
RN [1] {ECO:0000313|EMBL:EPJ47077.1, ECO:0000313|Proteomes:UP000014822}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=Rs1 {ECO:0000313|Proteomes:UP000014822};
RA Yi H., Goffredi S.;
RT "Comparative genomics of two novel heterotrophic symbionts of deep-sea
RT Osedax worms: functional variation and environmental selection.";
RL Submitted (MAY-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=pyridoxal 5'-phosphate; Xref=ChEBI:CHEBI:597326;
CC Evidence={ECO:0000256|ARBA:ARBA00001933};
CC -!- SIMILARITY: Belongs to the class-III pyridoxal-phosphate-dependent
CC aminotransferase family. {ECO:0000256|ARBA:ARBA00008954}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EPJ47077.1}.
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DR EMBL; ASZJ01000080; EPJ47077.1; -; Genomic_DNA.
DR AlphaFoldDB; S6HPR4; -.
DR PATRIC; fig|1330036.3.peg.1467; -.
DR Proteomes; UP000014822; Unassembled WGS sequence.
DR GO; GO:0030170; F:pyridoxal phosphate binding; IEA:InterPro.
DR GO; GO:0008483; F:transaminase activity; IEA:UniProtKB-KW.
DR CDD; cd12797; M23_peptidase; 1.
DR CDD; cd00610; OAT_like; 1.
DR Gene3D; 3.90.1200.10; -; 1.
DR Gene3D; 3.90.1150.10; Aspartate Aminotransferase, domain 1; 1.
DR Gene3D; 2.70.70.10; Glucose Permease (Domain IIA); 1.
DR Gene3D; 3.40.640.10; Type I PLP-dependent aspartate aminotransferase-like (Major domain); 1.
DR InterPro; IPR002575; Aminoglycoside_PTrfase.
DR InterPro; IPR005814; Aminotrans_3.
DR InterPro; IPR049704; Aminotrans_3_PPA_site.
DR InterPro; IPR011055; Dup_hybrid_motif.
DR InterPro; IPR011009; Kinase-like_dom_sf.
DR InterPro; IPR016047; Peptidase_M23.
DR InterPro; IPR015424; PyrdxlP-dep_Trfase.
DR InterPro; IPR015421; PyrdxlP-dep_Trfase_major.
DR InterPro; IPR015422; PyrdxlP-dep_Trfase_small.
DR PANTHER; PTHR45688; ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL; 1.
DR PANTHER; PTHR45688:SF3; ALANINE--GLYOXYLATE AMINOTRANSFERASE 2, MITOCHONDRIAL; 1.
DR Pfam; PF00202; Aminotran_3; 1.
DR Pfam; PF01636; APH; 1.
DR Pfam; PF01551; Peptidase_M23; 1.
DR SUPFAM; SSF51261; Duplicated hybrid motif; 1.
DR SUPFAM; SSF53383; PLP-dependent transferases; 1.
DR SUPFAM; SSF56112; Protein kinase-like (PK-like); 1.
DR PROSITE; PS00600; AA_TRANSFER_CLASS_3; 1.
PE 3: Inferred from homology;
KW Aminotransferase {ECO:0000313|EMBL:EPJ47077.1};
KW Pyridoxal phosphate {ECO:0000256|ARBA:ARBA00022898};
KW Reference proteome {ECO:0000313|Proteomes:UP000014822};
KW Transferase {ECO:0000313|EMBL:EPJ47077.1}.
FT DOMAIN 32..259
FT /note="Aminoglycoside phosphotransferase"
FT /evidence="ECO:0000259|Pfam:PF01636"
FT DOMAIN 427..525
FT /note="Peptidase M23"
FT /evidence="ECO:0000259|Pfam:PF01551"
SQ SEQUENCE 1007 AA; 110777 MW; A4A67341CFFB8745 CRC64;
MTTYWARVLQ NIWHIEANLT QLDGEFDLNF SVDGEQPAIL KVMRADCDTD FIDLQCSALV
YLSEHAPEIP IPRIIPTSQQ QLFSHVKGPD GEDRVVWLQQ KIQGQTYANF KPQNLSLISN
IGQVVGAVDK AWQGFKHPAL QRDFKWNLTT AEWISDELNI IDSAPKKALL SAIAEEFQAL
KPQLQALEQQ AIHNDVNDYN IIVNGSLTHQ AKVMGLIDLG DMCAGPRICN LAIACAYIVL
GQTDPEKALE SLVAGYHSKN PLTESELDML WPLLKMRLAV SIVISSLMSK ENPDDPYVVI
SQAPAWEFLL EHNVNQALIA SRLKVACGFE ISPQAANIRQ WLNSERGNFA AILGQDLQDS
KVKSLSVEIS TCPQNPFDLT GKEAAELGGE YQADEGVWLG YYNEPRLVYT DDAFKKGVYK
ASNRRTVHIG VDAFGPAGLE VHTPMAAKVA FAEYRAANLD YGGMVILSHQ TPAGDTFYTL
YGHLDPQSIA HLSLGQALEK GQVFAALGDL SGNGGWNPHL HFQLALTTTG MGDDWPGVAD
PDDLPLFNAI CPNPAALLNI ADQKIQYTGT SKAQVLAKRQ AHFGENLKLT YADPVMFLRG
WRHHLFDEWG RPYLDSYNNV PHVGHAHPRI QAVAADQLLR MNSNTRYLHP AQTAFADKIL
SKMPSSLEVC FFVNSGTEAN ELALRLSRAH TGGKDIITPN HGYHGNTTGA IDISAYKFNA
KGGSGQVDWV QLVEVADEYR GSYQKDDPDR ATKYAALVDK AIQAIADAPD NRKLAGFIAE
TFPSVGGQII PPQGYLAEVY AKIRAAGGVC IADEVQTAFG RLGEYYFAFE QQQVVPDIVV
MGKPIGNGHP IGVLVTTKEI AESFAKGPEY FSTFGGSNLS CRIGKEVLDI VDDERLMENA
RIMGDKLRQG LRALQEKHPL IGDVRGYGLF IGLDLVLNQS SKQPATQVAD YVKNRMREHR
ILMGTEGPAD NILKIRPPLT IEAQDVEMVL QVMDEVLSEA ACLLALN
//