ID S6J3M8_9PSED Unreviewed; 470 AA.
AC S6J3M8;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 24-JAN-2024, entry version 46.
DE SubName: Full=Sigma54 specific transcriptional regulator {ECO:0000313|EMBL:EPJ88193.1};
GN ORFNames=CFII64_07000 {ECO:0000313|EMBL:EPJ88193.1};
OS Pseudomonas sp. CFII64.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=911242 {ECO:0000313|EMBL:EPJ88193.1, ECO:0000313|Proteomes:UP000014850};
RN [1] {ECO:0000313|EMBL:EPJ88193.1, ECO:0000313|Proteomes:UP000014850}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CFII64 {ECO:0000313|EMBL:EPJ88193.1,
RC ECO:0000313|Proteomes:UP000014850};
RA Feris K.P., Lalor S.J.;
RL Submitted (NOV-2010) to the EMBL/GenBank/DDBJ databases.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EPJ88193.1}.
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DR EMBL; ATLO01000010; EPJ88193.1; -; Genomic_DNA.
DR RefSeq; WP_020290060.1; NZ_ATLO01000010.1.
DR AlphaFoldDB; S6J3M8; -.
DR PATRIC; fig|911242.4.peg.1402; -.
DR OrthoDB; 9804019at2; -.
DR Proteomes; UP000014850; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR Gene3D; 3.30.450.20; PAS domain; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR035965; PAS-like_dom_sf.
DR InterPro; IPR013656; PAS_4.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025943; Sigma_54_int_dom_ATP-bd_2.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR PANTHER; PTHR32071:SF99; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF08448; PAS_4; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR PRINTS; PR01590; HTHFIS.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF55785; PYP-like sensor domain (PAS domain); 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00676; SIGMA54_INTERACT_2; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 158..383
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 470 AA; 51578 MW; F014EC0AF3D2E4EA CRC64;
MKDSDSLHDY RRVRQLAIRS LFEIIEQSSE GTVIVDKDAR IVWINERYAR RFGLEDPSAA
LGQPCEKVIP GSLLRQVATN GRPILLDMMD TAKDPLVVMR LPIHDVSGDL IGAIGFALFD
ELHALTPLLK RYLSMQEELA STRSLLRARQ AKYSFAHFIG TSAASLEVKR RARRSAGADS
PVLLLGETGT GKELLAHAIH SASPRAHKAF VSINSAAIPE TLLEAEFFGT APGAFTGADR
KGRPGKLQIA QGGTLFLDEI GDMPLALQSK LLRVLQEKEY EPVGSNDVIQ SDIRLIAATS
IDLEAAIKRG EFRADLYYRL SVLPIRVPPL RERLDDLPSL SEAILEELHS QHELDSGALT
LLGQHAWPGN IRELRNVLER AALLSDELML NARDIRAAIG QIIPLGPCFG TVEPAVFETF
SQARQRFDRQ LIEQALINCS GSVVEAASQL GLGRSTLYKK MAALGIAESQ
//
