ID S7IWS5_9FIRM Unreviewed; 211 AA.
AC S7IWS5;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 24-JAN-2024, entry version 28.
DE SubName: Full=RNA polymerase sigma-54 factor {ECO:0000313|EMBL:EPP14410.1};
GN ORFNames=NM10_12358 {ECO:0000313|EMBL:EPP14410.1};
OS Megasphaera sp. NM10.
OC Bacteria; Bacillota; Negativicutes; Veillonellales; Veillonellaceae;
OC Megasphaera.
OX NCBI_TaxID=1273103 {ECO:0000313|EMBL:EPP14410.1, ECO:0000313|Proteomes:UP000014835};
RN [1] {ECO:0000313|EMBL:EPP14410.1, ECO:0000313|Proteomes:UP000014835}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=NM10 {ECO:0000313|EMBL:EPP14410.1};
RX PubMed=24260205;
RA Shetty S.A., Marathe N.P., Lanjekar V., Ranade D., Shouche Y.S.;
RT "Comparative Genome Analysis of Megasphaera sp. Reveals Niche
RT Specialization and Its Potential Role in the Human Gut.";
RL PLoS ONE 8:E79353-E79353(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EPP14410.1}.
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DR EMBL; APHY01000084; EPP14410.1; -; Genomic_DNA.
DR AlphaFoldDB; S7IWS5; -.
DR STRING; 1273103.NM10_12358; -.
DR PATRIC; fig|1273103.4.peg.2335; -.
DR eggNOG; COG1508; Bacteria.
DR Proteomes; UP000014835; Unassembled WGS sequence.
DR GO; GO:0001216; F:DNA-binding transcription activator activity; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR000394; RNA_pol_sigma_54.
DR InterPro; IPR007634; RNA_pol_sigma_54_DNA-bd.
DR PANTHER; PTHR32248; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR PANTHER; PTHR32248:SF4; RNA POLYMERASE SIGMA-54 FACTOR; 1.
DR Pfam; PF04552; Sigma54_DBD; 1.
DR PROSITE; PS00717; SIGMA54_1; 1.
DR PROSITE; PS50044; SIGMA54_3; 1.
PE 4: Predicted;
FT DOMAIN 54..209
FT /note="RNA polymerase sigma factor 54 DNA-binding"
FT /evidence="ECO:0000259|Pfam:PF04552"
SQ SEQUENCE 211 AA; 24985 MW; 0AC8ED93614C629F CRC64;
MFETDVTYII PDVIIKFTPA GHEITLNDGW VASYSMSDYY VRMMQSTTDE SVKKYFQTKY
TRCRLLFYNI ERRRQTLYNL TDAICHYQHD YLKNQGPLFP MTLADIAKEI GVHPSTISRS
IKNKYLQTSH MTLSFKDLFQ RPFPKTGKKI SKDSLKKELY HLIQSENTCH PYSDAKLTEI
LSSQFGRTFS RRLIQKYRTE LHILNSYERC K
//
