ID S9R238_9RHOB Unreviewed; 352 AA.
AC S9R238;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 27-MAR-2024, entry version 42.
DE SubName: Full=Transcriptional regulator, LacI family {ECO:0000313|EMBL:EPX87721.1};
GN ORFNames=ruthe_00121 {ECO:0000313|EMBL:EPX87721.1};
OS Rubellimicrobium thermophilum DSM 16684.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Rhodobacterales;
OC Roseobacteraceae; Rubellimicrobium.
OX NCBI_TaxID=1123069 {ECO:0000313|EMBL:EPX87721.1, ECO:0000313|Proteomes:UP000015346};
RN [1] {ECO:0000313|EMBL:EPX87721.1, ECO:0000313|Proteomes:UP000015346}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 16684 {ECO:0000313|EMBL:EPX87721.1,
RC ECO:0000313|Proteomes:UP000015346};
RX PubMed=24501632; DOI=10.4056/sigs.4247911;
RA Fiebig A., Riedel T., Gronow S., Petersen J., Klenk H.P., Goker M.;
RT "Genome sequence of the reddish-pigmented Rubellimicrobium thermophilum
RT type strain (DSM 16684(T)), a member of the Roseobacter clade.";
RL Stand. Genomic Sci. 8:480-490(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EPX87721.1}.
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DR EMBL; AOLV01000002; EPX87721.1; -; Genomic_DNA.
DR RefSeq; WP_021096266.1; NZ_KE557318.1.
DR AlphaFoldDB; S9R238; -.
DR STRING; 1123069.ruthe_00121; -.
DR HOGENOM; CLU_037628_6_1_5; -.
DR OrthoDB; 234496at2; -.
DR Proteomes; UP000015346; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR PANTHER; PTHR30146:SF109; TRANSCRIPTIONAL REGULATOR LACI_GALR-LIKE SENSOR DOMAIN-CONTAINING PROTEIN; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000015346};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 2..56
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 352 AA; 37693 MW; 8BDA8691ECF3C928 CRC64;
MTGIRQLADH LELSIGTVSR ALNGRPGVHP ATRERVLQAA RELGYVANQS GRSLRRGQTN
TVGFVVESGH PSNLGGDNFQ FATIDAMNLR LAEHGLDLAI LPCHSADDPI SFLARTVARG
VVDALVLTAT RQQDKRIAFL TRSRMPFLTL GRSATPGDYP WIDLDFFGVA QDSVARLVAL
GHRRIALALP NRDVALAHHY LDGYRAGLAA ADLPFSSDLV LRVDSSEEGG VALGGLILDH
PAAPTAVMVC SEVTVPGLYN HLASRGLTAG RDLAVIAFRQ SPPLRFLSPP AAGYDLSLRD
LGHELADAVA DLLAARQGHL SERPRTRIWP MTFCDSPSLA PPGRKRGSSS SS
//
