ID T0H2W8_9SPHN Unreviewed; 470 AA.
AC T0H2W8;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 27-MAR-2024, entry version 35.
DE RecName: Full=HTH cro/C1-type domain-containing protein {ECO:0000259|PROSITE:PS50943};
GN ORFNames=RLDS_25975 {ECO:0000313|EMBL:EQB10726.1};
OS Sphingobium lactosutens DS20.
OC Bacteria; Pseudomonadota; Alphaproteobacteria; Sphingomonadales;
OC Sphingomonadaceae; Sphingobium.
OX NCBI_TaxID=1331060 {ECO:0000313|EMBL:EQB10726.1, ECO:0000313|Proteomes:UP000015531};
RN [1] {ECO:0000313|EMBL:EQB10726.1, ECO:0000313|Proteomes:UP000015531}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DS20 {ECO:0000313|EMBL:EQB10726.1,
RC ECO:0000313|Proteomes:UP000015531};
RX PubMed=24051323;
RA Kumar R., Dwivedi V., Negi V., Khurana J.P., Lal R.;
RT "Draft Genome Sequence of Sphingobium lactosutens Strain DS20T, Isolated
RT from a Hexachlorocyclohexane Dumpsite.";
RL Genome Announc. 1:e00753-13(2013).
CC -!- SIMILARITY: Belongs to the short-chain fatty acyl-CoA assimilation
CC regulator (ScfR) family. {ECO:0000256|ARBA:ARBA00007227}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EQB10726.1}.
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DR EMBL; ATDP01000109; EQB10726.1; -; Genomic_DNA.
DR RefSeq; WP_021228629.1; NZ_ATDP01000109.1.
DR AlphaFoldDB; T0H2W8; -.
DR PATRIC; fig|1331060.3.peg.5045; -.
DR eggNOG; COG1396; Bacteria.
DR eggNOG; COG3800; Bacteria.
DR OrthoDB; 1123084at2; -.
DR Proteomes; UP000015531; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR026281; HTH_RamB.
DR InterPro; IPR010359; IrrE_HExxH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR018653; ScfR_C.
DR PANTHER; PTHR46797; HTH-TYPE TRANSCRIPTIONAL REGULATOR; 1.
DR PANTHER; PTHR46797:SF23; HTH-TYPE TRANSCRIPTIONAL REGULATOR PRPR; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF06114; Peptidase_M78; 1.
DR Pfam; PF09856; ScfRs; 1.
DR PIRSF; PIRSF019251; Rv0465c; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
PE 3: Inferred from homology;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 15..69
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
SQ SEQUENCE 470 AA; 51644 MW; C73CEC3D1EFDB58E CRC64;
MADIGDRKLY LGPKLRVLRR ELGLNQTQMA EELGVSPSYL NHLERNQRPL TAQMMLRLAN
TYDIDIRDFA APSTDGGPRE LSEILSDALV RDIGISRDEV LEVAENYPGV TEAVARFYRA
LTDLRRVPGE AFAGAAERVP MIAPIDWLRE MIARAGNYFA EIDAGAEAIA ADLPEDPALL
QATLRARLRD RHGISVQTVR ADLIAGRLRH FDMHRRRLML SERLPPSGRL FGAAWHLVAQ
ELADAIAAQV ARAAPPDEDS RRIATIALTN HAAAALIMPY ERFRQAAEQS RHDLPLLCDR
FGVSLEQLAH RLTSLNRTGA RGIPFFMAKI DGAGQIAKRF DGEAWPFARY GGTCPRWDAH
DAPASGAIAA QLIETMEGKR FVTLSASLPR GAAGGRARTV IALGCEAKHA ARIVHADGLD
AERGDATEVG PGCPLCERRA CPDRALPPVT RALDLHSYER TTAPYPFRRV
//
