ID T0PF16_9CLOT Unreviewed; 431 AA.
AC T0PF16;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE RecName: Full=HTH cro/C1-type domain-containing protein {ECO:0000259|PROSITE:PS50943};
GN ORFNames=M918_15325 {ECO:0000313|EMBL:EQB86307.1};
OS Clostridium sp. BL8.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=1354301 {ECO:0000313|EMBL:EQB86307.1, ECO:0000313|Proteomes:UP000015873};
RN [1] {ECO:0000313|EMBL:EQB86307.1, ECO:0000313|Proteomes:UP000015873}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=BL8 {ECO:0000313|EMBL:EQB86307.1,
RC ECO:0000313|Proteomes:UP000015873};
RX PubMed=25076986; DOI=10.1186/1757-4749-6-30;
RA Marathe N.P., Shetty S.A., Lanjekar V.B., Rasane M.H., Ranade D.R.,
RA Shouche Y.S.;
RT "Genome sequencing of multidrug resistant novel Clostridium sp. BL8 reveals
RT its potential for pathogenicity.";
RL Gut Pathog. 6:30-30(2014).
CC -!- SIMILARITY: Belongs to the Rap family. {ECO:0000256|ARBA:ARBA00038253}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EQB86307.1}.
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DR EMBL; AUPA01000230; EQB86307.1; -; Genomic_DNA.
DR RefSeq; WP_021285287.1; NZ_AUPA01000230.1.
DR AlphaFoldDB; T0PF16; -.
DR STRING; 1354301.M918_15325; -.
DR PATRIC; fig|1354301.3.peg.4174; -.
DR OrthoDB; 5516148at2; -.
DR Proteomes; UP000015873; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR CDD; cd00093; HTH_XRE; 1.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 2.
DR InterPro; IPR001387; Cro/C1-type_HTH.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR46630; TETRATRICOPEPTIDE REPEAT PROTEIN 29; 1.
DR PANTHER; PTHR46630:SF1; TETRATRICOPEPTIDE REPEAT PROTEIN 29; 1.
DR Pfam; PF01381; HTH_3; 1.
DR Pfam; PF13176; TPR_7; 1.
DR Pfam; PF13181; TPR_8; 1.
DR SMART; SM00530; HTH_XRE; 1.
DR SMART; SM00028; TPR; 6.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF48452; TPR-like; 1.
DR PROSITE; PS50943; HTH_CROC1; 1.
DR PROSITE; PS50005; TPR; 1.
PE 3: Inferred from homology;
KW Cytoplasm {ECO:0000256|ARBA:ARBA00022490};
KW Reference proteome {ECO:0000313|Proteomes:UP000015873};
KW TPR repeat {ECO:0000256|ARBA:ARBA00022803, ECO:0000256|PROSITE-
KW ProRule:PRU00339}.
FT DOMAIN 10..63
FT /note="HTH cro/C1-type"
FT /evidence="ECO:0000259|PROSITE:PS50943"
FT REPEAT 159..192
FT /note="TPR"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00339"
SQ SEQUENCE 431 AA; 50076 MW; 84F6708450D853B9 CRC64;
MAFLTPGEKL KYLRKQLNVT QEQLKAANIS RSFISLVECN KRRLTKETAE RLIEVLMKAA
ADNKVSIDVD LNYLTMSEVD AAIYYCNNII KTYDKLLNIE DLNEVIEISK KYRLNDIAYE
AFLIKANILY DENEYLHAFQ CYESALEFSI LLQNADSMSM LYNKLGKCKL KLISYEEALA
YFNRAYEIAE DQDNKIRKEN ALFNRALVYK FLGDIPLALS NLEEFLKIIT KEERLDIYLN
GMMLKGNCYV AINEYKNALD IFLQLNEIID KIKQPTLAGY MYNNTAVSYS KLGFIQQALD
YFDKAEEIRR NGEELNLAYT YIDKATMLME QSRTCEATNL LEKAMFIGEK FNDIKCVLDA
VSLLERIYID IGDNERLEEV YIHSLYILEN NNAKNKILEL LPKLTLLSIH SLNLDLSKKY
LNQMINLQKC N
//
