ID T1JEU9_STRMM Unreviewed; 999 AA.
AC T1JEU9;
DT 16-OCT-2013, integrated into UniProtKB/TrEMBL.
DT 16-OCT-2013, sequence version 1.
DT 27-MAR-2024, entry version 43.
DE RecName: Full=Pre-mRNA-splicing factor SYF1 {ECO:0008006|Google:ProtNLM};
OS Strigamia maritima (European centipede) (Geophilus maritimus).
OC Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Myriapoda; Chilopoda;
OC Pleurostigmophora; Geophilomorpha; Linotaeniidae; Strigamia.
OX NCBI_TaxID=126957 {ECO:0000313|EnsemblMetazoa:SMAR012352-PA, ECO:0000313|Proteomes:UP000014500};
RN [1] {ECO:0000313|Proteomes:UP000014500}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=Brora {ECO:0000313|Proteomes:UP000014500};
RA Richards S.R., Qu J., Jiang H., Jhangiani S.N., Agravi P., Goodspeed R.,
RA Gross S., Mandapat C., Jackson L., Mathew T., Pu L., Thornton R., Saada N.,
RA Wilczek-Boney K.B., Lee S., Kovar C., Wu Y., Scherer S.E., Worley K.C.,
RA Muzny D.M., Gibbs R.;
RL Submitted (MAY-2011) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EnsemblMetazoa:SMAR012352-PA}
RP IDENTIFICATION.
RG EnsemblMetazoa;
RL Submitted (FEB-2015) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
CC -!- SIMILARITY: Belongs to the crooked-neck family.
CC {ECO:0000256|ARBA:ARBA00008644}.
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DR EMBL; JH432130; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR AlphaFoldDB; T1JEU9; -.
DR STRING; 126957.T1JEU9; -.
DR EnsemblMetazoa; SMAR012352-RA; SMAR012352-PA; SMAR012352.
DR eggNOG; KOG2047; Eukaryota.
DR HOGENOM; CLU_007736_0_0_1; -.
DR OMA; KIWYNYL; -.
DR OrthoDB; 1130725at2759; -.
DR PhylomeDB; T1JEU9; -.
DR Proteomes; UP000014500; Unassembled WGS sequence.
DR GO; GO:0005681; C:spliceosomal complex; IEA:UniProtKB-KW.
DR GO; GO:0000398; P:mRNA splicing, via spliceosome; IEA:InterPro.
DR Gene3D; 1.25.40.430; -; 1.
DR Gene3D; 3.40.50.880; -; 1.
DR Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 4.
DR InterPro; IPR029062; Class_I_gatase-like.
DR InterPro; IPR003107; HAT.
DR InterPro; IPR045075; Syf1-like.
DR InterPro; IPR011990; TPR-like_helical_dom_sf.
DR InterPro; IPR019734; TPR_repeat.
DR PANTHER; PTHR11246; PRE-MRNA SPLICING FACTOR; 1.
DR PANTHER; PTHR11246:SF5; PRE-MRNA-SPLICING FACTOR SYF1; 1.
DR Pfam; PF13181; TPR_8; 1.
DR SMART; SM00386; HAT; 12.
DR SUPFAM; SSF52317; Class I glutamine amidotransferase-like; 1.
DR SUPFAM; SSF48452; TPR-like; 5.
PE 3: Inferred from homology;
KW mRNA processing {ECO:0000256|ARBA:ARBA00022728};
KW mRNA splicing {ECO:0000256|ARBA:ARBA00022728};
KW Reference proteome {ECO:0000313|Proteomes:UP000014500};
KW Spliceosome {ECO:0000256|ARBA:ARBA00022728}.
SQ SEQUENCE 999 AA; 116012 MW; 7D947B909BE389B1 CRC64;
MPEFLLDGSD EQNKRWLNDF RMKSMSVPIN LSKVDANRYS CIIIPHAPGA VVDLATDDDL
GLILNQFIKE KKPICAIGMG VAALFSAFDE DEKKDWSFKR YSLTCVCLTT VFELARSADF
INLAMVPEDV IKDNGGVYSH SDVDAVHVTS VIKINTMPDI IFNEEDLPYE EEILRNPYSI
KHWLRYILYK KDANNEIVNL IYERALRELP GSYKLWYNYL KLRRKQVYGK CITDPAYEDV
NNAFERSLVF MHKMPRIWLD YCQFLVDQKK ITRTRHAFDQ ALRALPVTQH RRIWPSYLQF
IKSYPIPETA IRIYRRYLKL CPENAEEYID YLKSIGRLDE AAIRLGSIVN KDDFVSKEGK
SNHQLWNELC DLTSKNPDRV KSLKVDAIIR GGLERYTEQL GQLWNSLADY YSRSGLFERA
RDIYEEAIQT VTTVRDFSQV FDAYAQFEES MVSTKIESSS GQEEDNIDID LRLARFEELM
DRRPLLLNSV LLRQNPHNVH EWHKRIKLFE GKLCEIINTY TEAVQTVEPK LATGKLNSLW
ISFAKFYDEN GQIEDARIIF EKAVQVPYVK VDDLAAVWCD WAESELKHEN YEQALKLMQR
ATTPPSRKVA YYDETETVQM RLHKSLKVWS MYADLEESFG TFKSCKTVYD RILDLRIATP
QIIINFGLFL EENNYFEDAF KAYEKGIALF KWPNVYSIWN TYLTKFLDRY GGKKLERARD
LLEQCLSDCP AKFAKNFYLL YAKLEEDHGL ARHAMAVYDR ATKAVLPDEM FEMFNIYIKK
AAEIYGITHT RAIYEKAIEM LPDEHARAMC LKFADLERKL GEVDRARAIY AHCSQICDPR
TTNEFWQTWK EFEIRHGNED TMREMLRIKR SVQATYNTQV NFMSAQMLAA SSQTTGTVSD
LAPGMKDDMR LLEAKVAHLS NEAKGDVPKT TKEVAFVRGS TQIEDEKLAE MSRSANPDEI
VIEEDGETDE EQTVEEVNIE QQDIPSEVFG GLKKDAKDD
//
