ID T1RR18_CYPCA Unreviewed; 208 AA.
AC T1RR18;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=MHC class II alpha chain {ECO:0000313|EMBL:AGN31823.1};
DE Flags: Fragment;
GN Name=Cyca-DXA {ECO:0000313|EMBL:AGN31823.1};
OS Cyprinus carpio 'color' (Oujiang color common carp).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes;
OC Cyprinidae; Cyprininae; Cyprinus.
OX NCBI_TaxID=749190 {ECO:0000313|EMBL:AGN31823.1};
RN [1] {ECO:0000313|EMBL:AGN31823.1}
RP NUCLEOTIDE SEQUENCE.
RA Zhao X., Liu Z., Li X., Wang Y., Wang C.;
RT "MHC class II alpha gene polymorphism and its association with
RT resistance/susceptibility to Aeromonas hydrophila in two patterns of
RT Oujiang color common carp (Cyprinus carpio var. color).";
RL Submitted (AUG-2012) to the EMBL/GenBank/DDBJ databases.
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DR EMBL; JX466838; AGN31823.1; -; mRNA.
DR AlphaFoldDB; T1RR18; -.
DR GO; GO:0042613; C:MHC class II protein complex; IEA:UniProtKB-KW.
DR GO; GO:0002250; P:adaptive immune response; IEA:UniProtKB-KW.
DR GO; GO:0002504; P:antigen processing and presentation of peptide or polysaccharide antigen via MHC class II; IEA:UniProtKB-KW.
DR Gene3D; 2.60.40.10; Immunoglobulins; 1.
DR InterPro; IPR007110; Ig-like_dom.
DR InterPro; IPR036179; Ig-like_dom_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR003006; Ig/MHC_CS.
DR InterPro; IPR003597; Ig_C1-set.
DR InterPro; IPR011162; MHC_I/II-like_Ag-recog.
DR InterPro; IPR014745; MHC_II_a/b_N.
DR InterPro; IPR001003; MHC_II_a_N.
DR PANTHER; PTHR19944:SF86; HLA CLASS II HISTOCOMPATIBILITY ANTIGEN, DR ALPHA CHAIN; 1.
DR PANTHER; PTHR19944; MHC CLASS II-RELATED; 1.
DR Pfam; PF07654; C1-set; 1.
DR Pfam; PF00993; MHC_II_alpha; 1.
DR SMART; SM00407; IGc1; 1.
DR SMART; SM00920; MHC_II_alpha; 1.
DR SUPFAM; SSF48726; Immunoglobulin; 1.
DR SUPFAM; SSF54452; MHC antigen-recognition domain; 1.
DR PROSITE; PS50835; IG_LIKE; 1.
DR PROSITE; PS00290; IG_MHC; 1.
PE 2: Evidence at transcript level;
KW Adaptive immunity {ECO:0000256|ARBA:ARBA00023130};
KW Glycoprotein {ECO:0000256|ARBA:ARBA00023180};
KW Immunity {ECO:0000256|ARBA:ARBA00022859};
KW Membrane {ECO:0000256|ARBA:ARBA00023136};
KW MHC II {ECO:0000256|ARBA:ARBA00023182}.
FT DOMAIN 91..193
FT /note="Ig-like"
FT /evidence="ECO:0000259|PROSITE:PS50835"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AGN31823.1"
FT NON_TER 208
FT /evidence="ECO:0000313|EMBL:AGN31823.1"
SQ SEQUENCE 208 AA; 23033 MW; 1ECFAAAEAF9B2560 CRC64;
LLMLALIVST ETQVVRRGVQ FAGCSDTEKE FLFGFDGEEL YHSDFIRKEG VVTLPDFADS
ISFPGFYELG VANIEVCRQN LATYIKAYNS PDEQLVPPDA SIYSEDDVVL GAQNTLICHV
TGLFPPPVNV SWTKNNQIVT EDVSLSQYRR KNDGTFNIFS SLKFTPAEGD IYRCTVYHKA
LESHFTTKTW EVDVAVPGVG PAVFCGVG
//
