ID T5D7H8_HELPX Unreviewed; 391 AA.
AC T5D7H8;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 27-MAR-2024, entry version 45.
DE SubName: Full=Recombinase RarA {ECO:0000313|EMBL:EQL73732.1};
GN ORFNames=N409_02560 {ECO:0000313|EMBL:EQL73732.1};
OS Helicobacter pylori FD719.
OC Bacteria; Campylobacterota; Epsilonproteobacteria; Campylobacterales;
OC Helicobacteraceae; Helicobacter.
OX NCBI_TaxID=1191286 {ECO:0000313|EMBL:EQL73732.1, ECO:0000313|Proteomes:UP000015963};
RN [1] {ECO:0000313|EMBL:EQL73732.1, ECO:0000313|Proteomes:UP000015963}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FD719 {ECO:0000313|EMBL:EQL73732.1,
RC ECO:0000313|Proteomes:UP000015963};
RX PubMed=23012278; DOI=10.1128/JB.01278-12;
RA Gunaletchumy S.P., Teh X., Khosravi Y., Ramli N.S., Chua E.G., Kavitha T.,
RA Mason J.N., Lee H.T., Alias H., Zaidan N.Z., Yassin N.B., Tay L.C.,
RA Rudd S., Mitchell H.M., Kaakoush N.O., Loke M.F., Goh K.L., Vadivelu J.;
RT "Draft genome sequences of Helicobacter pylori isolates from Malaysia,
RT cultured from patients with functional dyspepsia and gastric cancer.";
RL J. Bacteriol. 194:5695-5696(2012).
RN [2] {ECO:0000313|EMBL:EQL73732.1, ECO:0000313|Proteomes:UP000015963}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=FD719 {ECO:0000313|EMBL:EQL73732.1,
RC ECO:0000313|Proteomes:UP000015963};
RX PubMed=24051312;
RA Rehvathy V., Tan M.H., Gunaletchumy S.P., Teh X., Wang S., Baybayan P.,
RA Singh S., Ashby M., Kaakoush N.O., Mitchell H.M., Croft L.J., Goh K.L.,
RA Loke M.F., Vadivelu J.;
RT "Multiple genome sequences of Helicobacter pylori strains of diverse
RT disease and antibiotic resistance backgrounds from malaysia.";
RL Genome Announc. 1:E00687-E00713(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:EQL73732.1}.
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DR EMBL; AKHU02000013; EQL73732.1; -; Genomic_DNA.
DR RefSeq; WP_000060213.1; NZ_AKHU02000013.1.
DR AlphaFoldDB; T5D7H8; -.
DR PATRIC; fig|1191286.4.peg.1428; -.
DR Proteomes; UP000015963; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0009378; F:four-way junction helicase activity; IEA:InterPro.
DR GO; GO:0006310; P:DNA recombination; IEA:InterPro.
DR GO; GO:0006281; P:DNA repair; IEA:InterPro.
DR GO; GO:0006260; P:DNA replication; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR CDD; cd18139; HLD_clamp_RarA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 1.20.272.10; -; 1.
DR Gene3D; 1.10.3710.10; DNA polymerase III clamp loader subunits, C-terminal domain; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR032423; AAA_assoc_2.
DR InterPro; IPR008921; DNA_pol3_clamp-load_cplx_C.
DR InterPro; IPR021886; MgsA_C.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR008824; RuvB-like_N.
DR PANTHER; PTHR13779:SF7; ATPASE WRNIP1; 1.
DR PANTHER; PTHR13779; WERNER HELICASE-INTERACTING PROTEIN 1 FAMILY MEMBER; 1.
DR Pfam; PF16193; AAA_assoc_2; 1.
DR Pfam; PF12002; MgsA_C; 1.
DR Pfam; PF05496; RuvB_N; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR SUPFAM; SSF48019; post-AAA+ oligomerization domain-like; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741}.
FT DOMAIN 36..148
FT /note="AAA+ ATPase"
FT /evidence="ECO:0000259|SMART:SM00382"
SQ SEQUENCE 391 AA; 43981 MW; 0F4FB926186F38BD CRC64;
MSLTSLLNPK SLEDFLGQEH LIGKDAPLFK ALQSKHFPHA FFYGPPGVGK TSLAQIIARM
LERPILLFNA TDFKLEDLRL KLKNYQNTLL KPVIFIDETH RLNKTQQEFL LPIMEKDYAL
ILGASTQDPN YSLSHAIRSR SFIFELTPLK KSDLDKLCIK ALILLKKQIE PNAKTYLLNN
SAGDARALLN LLDLSAKIED PITLETLQSL RPHSLNDGSY SDDTHYNLTS ALIKSLRGSD
ENASIYYLAR LIAGGENPEF IARRLVIFAS EDIGNANPNA LNLAASCLFS VKQIGYPEAR
IILSQCVIYL ACSPKSNTAY RAINQALDCV QKGLLYPIPK HLLPNAKDYL YPHDYNGYVK
QDYLEKPLDL VSSQGIGFEK TLLEWLDKIR N
//
