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Database: UniProt
Entry: TDRKH_HUMAN
LinkDB: TDRKH_HUMAN
Original site: TDRKH_HUMAN 
ID   TDRKH_HUMAN             Reviewed;         561 AA.
AC   Q9Y2W6; D3DV24; Q5SZR3; Q5SZR5; Q8N582; Q9NYV5;
DT   15-DEC-2003, integrated into UniProtKB/Swiss-Prot.
DT   03-MAY-2011, sequence version 2.
DT   27-MAR-2024, entry version 182.
DE   RecName: Full=Tudor and KH domain-containing protein;
DE   AltName: Full=Tudor domain-containing protein 2;
GN   Name=TDRKH; Synonyms=TDRD2;
OS   Homo sapiens (Human).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae;
OC   Homo.
OX   NCBI_TaxID=9606;
RN   [1]
RP   NUCLEOTIDE SEQUENCE [MRNA] (ISOFORM 1).
RC   TISSUE=Aorta;
RX   PubMed=10767542; DOI=10.1016/s0378-1119(00)00087-1;
RA   Lamb F.S., Barna T.J., Goud C., Marenholz I., Mischke D., Schutte B.C.;
RT   "Complex RNA processing of TDRKH, a novel gene encoding the putative RNA-
RT   binding tudor and KH domains.";
RL   Gene 246:209-218(2000).
RN   [2]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=16710414; DOI=10.1038/nature04727;
RA   Gregory S.G., Barlow K.F., McLay K.E., Kaul R., Swarbreck D., Dunham A.,
RA   Scott C.E., Howe K.L., Woodfine K., Spencer C.C.A., Jones M.C., Gillson C.,
RA   Searle S., Zhou Y., Kokocinski F., McDonald L., Evans R., Phillips K.,
RA   Atkinson A., Cooper R., Jones C., Hall R.E., Andrews T.D., Lloyd C.,
RA   Ainscough R., Almeida J.P., Ambrose K.D., Anderson F., Andrew R.W.,
RA   Ashwell R.I.S., Aubin K., Babbage A.K., Bagguley C.L., Bailey J.,
RA   Beasley H., Bethel G., Bird C.P., Bray-Allen S., Brown J.Y., Brown A.J.,
RA   Buckley D., Burton J., Bye J., Carder C., Chapman J.C., Clark S.Y.,
RA   Clarke G., Clee C., Cobley V., Collier R.E., Corby N., Coville G.J.,
RA   Davies J., Deadman R., Dunn M., Earthrowl M., Ellington A.G., Errington H.,
RA   Frankish A., Frankland J., French L., Garner P., Garnett J., Gay L.,
RA   Ghori M.R.J., Gibson R., Gilby L.M., Gillett W., Glithero R.J.,
RA   Grafham D.V., Griffiths C., Griffiths-Jones S., Grocock R., Hammond S.,
RA   Harrison E.S.I., Hart E., Haugen E., Heath P.D., Holmes S., Holt K.,
RA   Howden P.J., Hunt A.R., Hunt S.E., Hunter G., Isherwood J., James R.,
RA   Johnson C., Johnson D., Joy A., Kay M., Kershaw J.K., Kibukawa M.,
RA   Kimberley A.M., King A., Knights A.J., Lad H., Laird G., Lawlor S.,
RA   Leongamornlert D.A., Lloyd D.M., Loveland J., Lovell J., Lush M.J.,
RA   Lyne R., Martin S., Mashreghi-Mohammadi M., Matthews L., Matthews N.S.W.,
RA   McLaren S., Milne S., Mistry S., Moore M.J.F., Nickerson T., O'Dell C.N.,
RA   Oliver K., Palmeiri A., Palmer S.A., Parker A., Patel D., Pearce A.V.,
RA   Peck A.I., Pelan S., Phelps K., Phillimore B.J., Plumb R., Rajan J.,
RA   Raymond C., Rouse G., Saenphimmachak C., Sehra H.K., Sheridan E.,
RA   Shownkeen R., Sims S., Skuce C.D., Smith M., Steward C., Subramanian S.,
RA   Sycamore N., Tracey A., Tromans A., Van Helmond Z., Wall M., Wallis J.M.,
RA   White S., Whitehead S.L., Wilkinson J.E., Willey D.L., Williams H.,
RA   Wilming L., Wray P.W., Wu Z., Coulson A., Vaudin M., Sulston J.E.,
RA   Durbin R.M., Hubbard T., Wooster R., Dunham I., Carter N.P., McVean G.,
RA   Ross M.T., Harrow J., Olson M.V., Beck S., Rogers J., Bentley D.R.;
RT   "The DNA sequence and biological annotation of human chromosome 1.";
RL   Nature 441:315-321(2006).
RN   [3]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA   Mural R.J., Istrail S., Sutton G.G., Florea L., Halpern A.L., Mobarry C.M.,
RA   Lippert R., Walenz B., Shatkay H., Dew I., Miller J.R., Flanigan M.J.,
RA   Edwards N.J., Bolanos R., Fasulo D., Halldorsson B.V., Hannenhalli S.,
RA   Turner R., Yooseph S., Lu F., Nusskern D.R., Shue B.C., Zheng X.H.,
RA   Zhong F., Delcher A.L., Huson D.H., Kravitz S.A., Mouchard L., Reinert K.,
RA   Remington K.A., Clark A.G., Waterman M.S., Eichler E.E., Adams M.D.,
RA   Hunkapiller M.W., Myers E.W., Venter J.C.;
RL   Submitted (SEP-2005) to the EMBL/GenBank/DDBJ databases.
RN   [4]
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE MRNA] (ISOFORM 1).
RC   TISSUE=Hypothalamus;
RX   PubMed=15489334; DOI=10.1101/gr.2596504;
RG   The MGC Project Team;
RT   "The status, quality, and expansion of the NIH full-length cDNA project:
RT   the Mammalian Gene Collection (MGC).";
RL   Genome Res. 14:2121-2127(2004).
RN   [5]
RP   PHOSPHORYLATION [LARGE SCALE ANALYSIS] AT SER-278, AND IDENTIFICATION BY
RP   MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Erythroleukemia;
RX   PubMed=23186163; DOI=10.1021/pr300630k;
RA   Zhou H., Di Palma S., Preisinger C., Peng M., Polat A.N., Heck A.J.,
RA   Mohammed S.;
RT   "Toward a comprehensive characterization of a human cancer cell
RT   phosphoproteome.";
RL   J. Proteome Res. 12:260-271(2013).
RN   [6]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RC   TISSUE=Liver;
RX   PubMed=24275569; DOI=10.1016/j.jprot.2013.11.014;
RA   Bian Y., Song C., Cheng K., Dong M., Wang F., Huang J., Sun D., Wang L.,
RA   Ye M., Zou H.;
RT   "An enzyme assisted RP-RPLC approach for in-depth analysis of human liver
RT   phosphoproteome.";
RL   J. Proteomics 96:253-262(2014).
RN   [7]
RP   UBIQUITINATION AT LYS-65; LYS-76; LYS-110; LYS-112; LYS-152; LYS-175;
RP   LYS-181; LYS-187; LYS-193; LYS-256; LYS-267; LYS-479; LYS-510 AND LYS-529.
RX   PubMed=25621951; DOI=10.1038/ncb3097;
RA   Cunningham C.N., Baughman J.M., Phu L., Tea J.S., Yu C., Coons M.,
RA   Kirkpatrick D.S., Bingol B., Corn J.E.;
RT   "USP30 and parkin homeostatically regulate atypical ubiquitin chains on
RT   mitochondria.";
RL   Nat. Cell Biol. 17:160-169(2015).
RN   [8]
RP   IDENTIFICATION BY MASS SPECTROMETRY [LARGE SCALE ANALYSIS].
RX   PubMed=25944712; DOI=10.1002/pmic.201400617;
RA   Vaca Jacome A.S., Rabilloud T., Schaeffer-Reiss C., Rompais M., Ayoub D.,
RA   Lane L., Bairoch A., Van Dorsselaer A., Carapito C.;
RT   "N-terminome analysis of the human mitochondrial proteome.";
RL   Proteomics 15:2519-2524(2015).
RN   [9]
RP   STRUCTURE BY NMR OF 329-425.
RG   RIKEN structural genomics initiative (RSGI);
RT   "Solution structure of the Tudor domain of Tudor and KH domain-containing
RT   protein.";
RL   Submitted (SEP-2006) to the PDB data bank.
CC   -!- FUNCTION: Participates in the primary piRNA biogenesis pathway and is
CC       required during spermatogenesis to repress transposable elements and
CC       prevent their mobilization, which is essential for the germline
CC       integrity. The piRNA metabolic process mediates the repression of
CC       transposable elements during meiosis by forming complexes composed of
CC       piRNAs and Piwi proteins and govern the methylation and subsequent
CC       repression of transposons. Required for the final steps of primary
CC       piRNA biogenesis by participating in the processing of 31-37 nt
CC       intermediates into mature piRNAs. May act in pi-bodies and piP-bodies
CC       by transferring piRNA precursors or intermediates to or between these
CC       granules. {ECO:0000250|UniProtKB:Q80VL1}.
CC   -!- SUBUNIT: Interacts with (symmetrically methylated) PIWIL1, PIWIL2 and
CC       PIWIL4. {ECO:0000250|UniProtKB:Q80VL1}.
CC   -!- INTERACTION:
CC       Q9Y2W6; B3EWG5: FAM25C; NbExp=3; IntAct=EBI-12842466, EBI-14240149;
CC       Q9Y2W6; Q9NS86: LANCL2; NbExp=3; IntAct=EBI-12842466, EBI-2510837;
CC       Q9Y2W6; Q9BV90: SNRNP25; NbExp=3; IntAct=EBI-12842466, EBI-9675976;
CC       Q9Y2W6; Q8NCN2: ZBTB34; NbExp=3; IntAct=EBI-12842466, EBI-11317716;
CC       Q9Y2W6; Q8TF47: ZFP90; NbExp=3; IntAct=EBI-12842466, EBI-11419867;
CC   -!- SUBCELLULAR LOCATION: Cytoplasm {ECO:0000250|UniProtKB:Q80VL1}.
CC       Mitochondrion {ECO:0000250|UniProtKB:Q80VL1}. Note=Probable component
CC       of the meiotic nuage, also named P granule, a germ-cell-specific
CC       organelle required to repress transposon activity during meiosis.
CC       Colocalizes with pi- and piP-bodies, a subset of the nuage which
CC       contains secondary piRNAs. Associated with mitochondria in the
CC       germline. {ECO:0000250|UniProtKB:Q80VL1}.
CC   -!- ALTERNATIVE PRODUCTS:
CC       Event=Alternative splicing; Named isoforms=2;
CC       Name=1;
CC         IsoId=Q9Y2W6-2; Sequence=Displayed;
CC       Name=2;
CC         IsoId=Q9Y2W6-3; Sequence=VSP_040981;
CC   -!- PTM: Ubiquitinated by PRKN during mitophagy, leading to its degradation
CC       and enhancement of mitophagy. Deubiquitinated by USP30.
CC       {ECO:0000269|PubMed:25621951}.
CC   -!- SIMILARITY: Belongs to the Tdrkh family. {ECO:0000305}.
CC   -!- SEQUENCE CAUTION:
CC       Sequence=AAD30971.1; Type=Erroneous termination; Note=Extended C-terminus.; Evidence={ECO:0000305};
CC       Sequence=BC022467; Type=Erroneous termination; Note=Truncated C-terminus.; Evidence={ECO:0000305};
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DR   EMBL; AF119121; AAD30971.1; ALT_SEQ; mRNA.
DR   EMBL; AF227192; AAF36701.1; -; mRNA.
DR   EMBL; AL589765; -; NOT_ANNOTATED_CDS; Genomic_DNA.
DR   EMBL; CH471121; EAW53411.1; -; Genomic_DNA.
DR   EMBL; CH471121; EAW53409.1; -; Genomic_DNA.
DR   EMBL; CH471121; EAW53410.1; -; Genomic_DNA.
DR   EMBL; BC022467; -; NOT_ANNOTATED_CDS; mRNA.
DR   CCDS; CCDS41394.1; -. [Q9Y2W6-2]
DR   CCDS; CCDS41395.1; -. [Q9Y2W6-3]
DR   RefSeq; NP_001077432.1; NM_001083963.1. [Q9Y2W6-2]
DR   RefSeq; NP_001077433.1; NM_001083964.1. [Q9Y2W6-3]
DR   RefSeq; NP_001077434.1; NM_001083965.1. [Q9Y2W6-2]
DR   RefSeq; NP_006853.2; NM_006862.3. [Q9Y2W6-2]
DR   RefSeq; XP_016855611.1; XM_017000122.1. [Q9Y2W6-2]
DR   RefSeq; XP_016855612.1; XM_017000123.1. [Q9Y2W6-2]
DR   RefSeq; XP_016855613.1; XM_017000124.1. [Q9Y2W6-2]
DR   RefSeq; XP_016855614.1; XM_017000125.1. [Q9Y2W6-2]
DR   RefSeq; XP_016855615.1; XM_017000126.1. [Q9Y2W6-2]
DR   RefSeq; XP_016855616.1; XM_017000127.1. [Q9Y2W6-2]
DR   PDB; 2DIQ; NMR; -; A=329-425.
DR   PDB; 3FDR; X-ray; 1.75 A; A=327-420.
DR   PDB; 5J39; X-ray; 1.95 A; A/B=309-498.
DR   PDB; 6B57; X-ray; 1.93 A; A/B=309-497.
DR   PDB; 6PI7; X-ray; 2.80 A; A/D=305-525.
DR   PDBsum; 2DIQ; -.
DR   PDBsum; 3FDR; -.
DR   PDBsum; 5J39; -.
DR   PDBsum; 6B57; -.
DR   PDBsum; 6PI7; -.
DR   AlphaFoldDB; Q9Y2W6; -.
DR   SMR; Q9Y2W6; -.
DR   BioGRID; 116212; 78.
DR   DIP; DIP-59459N; -.
DR   IntAct; Q9Y2W6; 27.
DR   MINT; Q9Y2W6; -.
DR   STRING; 9606.ENSP00000357812; -.
DR   iPTMnet; Q9Y2W6; -.
DR   PhosphoSitePlus; Q9Y2W6; -.
DR   SwissPalm; Q9Y2W6; -.
DR   BioMuta; TDRKH; -.
DR   DMDM; 332278122; -.
DR   EPD; Q9Y2W6; -.
DR   jPOST; Q9Y2W6; -.
DR   MassIVE; Q9Y2W6; -.
DR   MaxQB; Q9Y2W6; -.
DR   PaxDb; 9606-ENSP00000357812; -.
DR   PeptideAtlas; Q9Y2W6; -.
DR   ProteomicsDB; 85917; -. [Q9Y2W6-2]
DR   ProteomicsDB; 85918; -. [Q9Y2W6-3]
DR   Pumba; Q9Y2W6; -.
DR   ABCD; Q9Y2W6; 6 sequenced antibodies.
DR   Antibodypedia; 10583; 107 antibodies from 25 providers.
DR   DNASU; 11022; -.
DR   Ensembl; ENST00000368822.5; ENSP00000357812.1; ENSG00000182134.17. [Q9Y2W6-2]
DR   Ensembl; ENST00000368824.8; ENSP00000357815.3; ENSG00000182134.17. [Q9Y2W6-2]
DR   Ensembl; ENST00000368825.7; ENSP00000357817.3; ENSG00000182134.17. [Q9Y2W6-3]
DR   Ensembl; ENST00000368827.10; ENSP00000357819.6; ENSG00000182134.17. [Q9Y2W6-2]
DR   Ensembl; ENST00000458431.6; ENSP00000395718.2; ENSG00000182134.17. [Q9Y2W6-2]
DR   GeneID; 11022; -.
DR   KEGG; hsa:11022; -.
DR   MANE-Select; ENST00000368824.8; ENSP00000357815.3; NM_001083965.2; NP_001077434.1.
DR   UCSC; uc001eza.6; human. [Q9Y2W6-2]
DR   AGR; HGNC:11713; -.
DR   CTD; 11022; -.
DR   DisGeNET; 11022; -.
DR   GeneCards; TDRKH; -.
DR   HGNC; HGNC:11713; TDRKH.
DR   HPA; ENSG00000182134; Tissue enhanced (parathyroid gland, testis).
DR   MalaCards; TDRKH; -.
DR   MIM; 609501; gene.
DR   neXtProt; NX_Q9Y2W6; -.
DR   OpenTargets; ENSG00000182134; -.
DR   PharmGKB; PA36431; -.
DR   VEuPathDB; HostDB:ENSG00000182134; -.
DR   eggNOG; KOG2279; Eukaryota.
DR   GeneTree; ENSGT00940000159364; -.
DR   InParanoid; Q9Y2W6; -.
DR   OMA; NMVQEMT; -.
DR   OrthoDB; 375531at2759; -.
DR   PhylomeDB; Q9Y2W6; -.
DR   TreeFam; TF318292; -.
DR   PathwayCommons; Q9Y2W6; -.
DR   Reactome; R-HSA-5601884; PIWI-interacting RNA (piRNA) biogenesis.
DR   SignaLink; Q9Y2W6; -.
DR   BioGRID-ORCS; 11022; 11 hits in 1166 CRISPR screens.
DR   EvolutionaryTrace; Q9Y2W6; -.
DR   GeneWiki; TDRKH; -.
DR   GenomeRNAi; 11022; -.
DR   Pharos; Q9Y2W6; Tbio.
DR   PRO; PR:Q9Y2W6; -.
DR   Proteomes; UP000005640; Chromosome 1.
DR   RNAct; Q9Y2W6; Protein.
DR   Bgee; ENSG00000182134; Expressed in primordial germ cell in gonad and 122 other cell types or tissues.
DR   ExpressionAtlas; Q9Y2W6; baseline and differential.
DR   Genevisible; Q9Y2W6; HS.
DR   GO; GO:0005739; C:mitochondrion; ISS:UniProtKB.
DR   GO; GO:0043186; C:P granule; IBA:GO_Central.
DR   GO; GO:0071546; C:pi-body; ISS:UniProtKB.
DR   GO; GO:0071547; C:piP-body; ISS:UniProtKB.
DR   GO; GO:0003723; F:RNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0009566; P:fertilization; ISS:UniProtKB.
DR   GO; GO:0007140; P:male meiotic nuclear division; ISS:UniProtKB.
DR   GO; GO:0030719; P:P granule organization; IBA:GO_Central.
DR   GO; GO:0034587; P:piRNA processing; ISS:UniProtKB.
DR   GO; GO:0007283; P:spermatogenesis; ISS:UniProtKB.
DR   CDD; cd22428; KH-I_TDRKH_rpt1; 1.
DR   CDD; cd22429; KH-I_TDRKH_rpt2; 1.
DR   CDD; cd20412; Tudor_TDRD2; 1.
DR   Gene3D; 2.30.30.140; -; 1.
DR   Gene3D; 2.40.50.90; -; 1.
DR   Gene3D; 3.30.1370.10; K Homology domain, type 1; 2.
DR   InterPro; IPR047382; KH-I_TDRKH_rpt1.
DR   InterPro; IPR047381; KH-I_TDRKH_rpt2.
DR   InterPro; IPR004087; KH_dom.
DR   InterPro; IPR004088; KH_dom_type_1.
DR   InterPro; IPR036612; KH_dom_type_1_sf.
DR   InterPro; IPR035437; SNase_OB-fold_sf.
DR   InterPro; IPR047380; TDRD2-like_tudor.
DR   InterPro; IPR002999; Tudor.
DR   PANTHER; PTHR22948:SF18; TUDOR AND KH DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR22948; TUDOR DOMAIN CONTAINING PROTEIN; 1.
DR   Pfam; PF00013; KH_1; 2.
DR   Pfam; PF00567; TUDOR; 1.
DR   SMART; SM00322; KH; 2.
DR   SMART; SM00333; TUDOR; 1.
DR   SUPFAM; SSF54791; Eukaryotic type KH-domain (KH-domain type I); 2.
DR   SUPFAM; SSF63748; Tudor/PWWP/MBT; 1.
DR   PROSITE; PS50084; KH_TYPE_1; 2.
DR   PROSITE; PS50304; TUDOR; 1.
PE   1: Evidence at protein level;
KW   3D-structure; Alternative splicing; Cytoplasm; Differentiation;
KW   Isopeptide bond; Mitochondrion; Phosphoprotein; Reference proteome; Repeat;
KW   RNA-binding; RNA-mediated gene silencing; Spermatogenesis; Ubl conjugation.
FT   CHAIN           1..561
FT                   /note="Tudor and KH domain-containing protein"
FT                   /id="PRO_0000050141"
FT   DOMAIN          52..115
FT                   /note="KH 1"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00117"
FT   DOMAIN          124..190
FT                   /note="KH 2"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00117"
FT   DOMAIN          353..412
FT                   /note="Tudor"
FT                   /evidence="ECO:0000255|PROSITE-ProRule:PRU00211"
FT   REGION          219..262
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   MOD_RES         278
FT                   /note="Phosphoserine"
FT                   /evidence="ECO:0007744|PubMed:23186163"
FT   CROSSLNK        65
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000269|PubMed:25621951"
FT   CROSSLNK        76
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000269|PubMed:25621951"
FT   CROSSLNK        110
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000269|PubMed:25621951"
FT   CROSSLNK        112
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000269|PubMed:25621951"
FT   CROSSLNK        152
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000269|PubMed:25621951"
FT   CROSSLNK        175
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000269|PubMed:25621951"
FT   CROSSLNK        181
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000269|PubMed:25621951"
FT   CROSSLNK        187
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000269|PubMed:25621951"
FT   CROSSLNK        193
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000269|PubMed:25621951"
FT   CROSSLNK        256
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000269|PubMed:25621951"
FT   CROSSLNK        267
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000269|PubMed:25621951"
FT   CROSSLNK        479
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000269|PubMed:25621951"
FT   CROSSLNK        510
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000269|PubMed:25621951"
FT   CROSSLNK        529
FT                   /note="Glycyl lysine isopeptide (Lys-Gly) (interchain with
FT                   G-Cter in ubiquitin)"
FT                   /evidence="ECO:0000269|PubMed:25621951"
FT   VAR_SEQ         108..152
FT                   /note="Missing (in isoform 2)"
FT                   /evidence="ECO:0000305"
FT                   /id="VSP_040981"
FT   VARIANT         257
FT                   /note="G -> A (in dbSNP:rs17853082)"
FT                   /id="VAR_055980"
FT   CONFLICT        15
FT                   /note="Q -> H (in Ref. 1; AAF36701)"
FT                   /evidence="ECO:0000305"
FT   CONFLICT        321
FT                   /note="F -> S (in Ref. 1; AAF36701)"
FT                   /evidence="ECO:0000305"
FT   STRAND          309..317
FT                   /evidence="ECO:0007829|PDB:6B57"
FT   STRAND          320..325
FT                   /evidence="ECO:0007829|PDB:6B57"
FT   HELIX           332..344
FT                   /evidence="ECO:0007829|PDB:3FDR"
FT   STRAND          359..363
FT                   /evidence="ECO:0007829|PDB:3FDR"
FT   TURN            365..367
FT                   /evidence="ECO:0007829|PDB:3FDR"
FT   STRAND          370..378
FT                   /evidence="ECO:0007829|PDB:3FDR"
FT   STRAND          380..382
FT                   /evidence="ECO:0007829|PDB:2DIQ"
FT   STRAND          384..388
FT                   /evidence="ECO:0007829|PDB:3FDR"
FT   TURN            389..391
FT                   /evidence="ECO:0007829|PDB:3FDR"
FT   STRAND          394..397
FT                   /evidence="ECO:0007829|PDB:3FDR"
FT   HELIX           399..401
FT                   /evidence="ECO:0007829|PDB:3FDR"
FT   HELIX           407..410
FT                   /evidence="ECO:0007829|PDB:3FDR"
FT   STRAND          417..421
FT                   /evidence="ECO:0007829|PDB:6B57"
FT   STRAND          424..430
FT                   /evidence="ECO:0007829|PDB:6B57"
FT   HELIX           433..442
FT                   /evidence="ECO:0007829|PDB:6B57"
FT   TURN            444..448
FT                   /evidence="ECO:0007829|PDB:5J39"
FT   STRAND          451..455
FT                   /evidence="ECO:0007829|PDB:6B57"
FT   STRAND          468..473
FT                   /evidence="ECO:0007829|PDB:6B57"
FT   STRAND          475..477
FT                   /evidence="ECO:0007829|PDB:5J39"
FT   HELIX           482..488
FT                   /evidence="ECO:0007829|PDB:6B57"
FT   STRAND          491..494
FT                   /evidence="ECO:0007829|PDB:6B57"
SQ   SEQUENCE   561 AA;  62046 MW;  F89EBBDC48A8D420 CRC64;
     MSTERTSWTS LSTIQKIALG LGIPASATVA YILYRRYRES REERLTFVGE DDIEIEMRVP
     QEAVKLIIGR QGANIKQLRK QTGARIDVDT EDVGDERVLL ISGFPVQVCK AKAAIHQILT
     ENTPVSEQLS VPQRSVGRII GRGGETIRSI CKASGAKITC DKESEGTLLL SRLIKISGTQ
     KEVAAAKHLI LEKVSEDEEL RKRIAHSAET RVPRKQPISV RREDMTEPGG AGEPALWKNT
     SSSMEPTAPL VTPPPKGGGD MAVVVSKEGS WEKPSDDSFQ KSEAQAIPEM PMFEIPSPDF
     SFHADEYLEV YVSASEHPNH FWIQIVGSRS LQLDKLVNEM TQHYENSVPE DLTVHVGDIV
     AAPLPTNGSW YRARVLGTLE NGNLDLYFVD FGDNGDCPLK DLRALRSDFL SLPFQAIECS
     LARIAPSGDQ WEEEALDEFD RLTHCADWKP LVAKISSYVQ TGISTWPKIY LYDTSNGKKL
     DIGLELVHKG YAIELPEDIE ENRAVPDMLK DMATETDASL STLLTETKKS SGEITHTLSC
     LSLSEAASMS GDDNLEDDYL L
//
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