ID U1JE05_9GAMM Unreviewed; 628 AA.
AC U1JE05;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 27-MAR-2024, entry version 28.
DE SubName: Full=PKD repeat-containing protein {ECO:0000313|EMBL:ERG19626.1};
GN ORFNames=PCIT_05704 {ECO:0000313|EMBL:ERG19626.1};
OS Pseudoalteromonas citrea DSM 8771.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Pseudoalteromonadaceae; Pseudoalteromonas.
OX NCBI_TaxID=1117314 {ECO:0000313|EMBL:ERG19626.1, ECO:0000313|Proteomes:UP000016487};
RN [1] {ECO:0000313|EMBL:ERG19626.1, ECO:0000313|Proteomes:UP000016487}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 8771 {ECO:0000313|Proteomes:UP000016487};
RX PubMed=22535931; DOI=10.1128/JB.00265-12;
RA Xie B.B., Shu Y.L., Qin Q.L., Rong J.C., Zhang X.Y., Chen X.L., Shi M.,
RA He H.L., Zhou B.C., Zhang Y.Z.;
RT "Genome sequences of type strains of seven species of the marine bacterium
RT Pseudoalteromonas.";
RL J. Bacteriol. 194:2746-2747(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ERG19626.1}.
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DR EMBL; AHBZ02000061; ERG19626.1; -; Genomic_DNA.
DR AlphaFoldDB; U1JE05; -.
DR STRING; 1117314.PCIT_05704; -.
DR eggNOG; COG3291; Bacteria.
DR eggNOG; COG3591; Bacteria.
DR OrthoDB; 9790784at2; -.
DR Proteomes; UP000016487; Unassembled WGS sequence.
DR GO; GO:0005576; C:extracellular region; IEA:InterPro.
DR GO; GO:0030246; F:carbohydrate binding; IEA:InterPro.
DR GO; GO:0004553; F:hydrolase activity, hydrolyzing O-glycosyl compounds; IEA:InterPro.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR CDD; cd12215; ChiC_BD; 1.
DR CDD; cd00146; PKD; 2.
DR Gene3D; 2.10.10.20; Carbohydrate-binding module superfamily 5/12; 1.
DR Gene3D; 2.60.40.10; Immunoglobulins; 2.
DR Gene3D; 2.40.10.10; Trypsin-like serine proteases; 2.
DR InterPro; IPR003610; CBM_fam5/12.
DR InterPro; IPR036573; CBM_sf_5/12.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR009003; Peptidase_S1_PA.
DR InterPro; IPR043504; Peptidase_S1_PA_chymotrypsin.
DR InterPro; IPR022409; PKD/Chitinase_dom.
DR InterPro; IPR000601; PKD_dom.
DR InterPro; IPR035986; PKD_dom_sf.
DR PANTHER; PTHR36234; LYSYL ENDOPEPTIDASE; 1.
DR PANTHER; PTHR36234:SF5; LYSYL ENDOPEPTIDASE; 1.
DR Pfam; PF02839; CBM_5_12; 1.
DR Pfam; PF18911; PKD_4; 2.
DR Pfam; PF13365; Trypsin_2; 1.
DR SMART; SM00495; ChtBD3; 1.
DR SMART; SM00089; PKD; 2.
DR SUPFAM; SSF51055; Carbohydrate binding domain; 1.
DR SUPFAM; SSF49299; PKD domain; 2.
DR SUPFAM; SSF50494; Trypsin-like serine proteases; 1.
DR PROSITE; PS50093; PKD; 2.
PE 4: Predicted;
KW Carbohydrate metabolism {ECO:0000256|ARBA:ARBA00023024};
KW Chitin degradation {ECO:0000256|ARBA:ARBA00023024};
KW Hydrolase {ECO:0000256|ARBA:ARBA00022801};
KW Polysaccharide degradation {ECO:0000256|ARBA:ARBA00023024};
KW Reference proteome {ECO:0000313|Proteomes:UP000016487};
KW Signal {ECO:0000256|SAM:SignalP}.
FT SIGNAL 1..24
FT /evidence="ECO:0000256|SAM:SignalP"
FT CHAIN 25..628
FT /evidence="ECO:0000256|SAM:SignalP"
FT /id="PRO_5004613067"
FT DOMAIN 406..495
FT /note="PKD"
FT /evidence="ECO:0000259|PROSITE:PS50093"
FT DOMAIN 492..578
FT /note="PKD"
FT /evidence="ECO:0000259|PROSITE:PS50093"
SQ SEQUENCE 628 AA; 67308 MW; 1E2EBA3C655408EA CRC64;
MIPCKVRKAV LPACALLLSS ATFAGVLDAS AQKTDIAKIV SHQLSLNAGH AGITTQDVKE
HIINHPDAQF IKINFAQLSL PEGAYIEVSN LEGTESYRYD HNDSDVKASM SVSSDTVKVT
LVSPSSVQWG ENHGVEIQDF YAGFSDFELA ERAAMFESGD IQPNSTCGVN ERQDVACWET
SHPVEHERSR PVARLLIGGR SLCTAWRVGA DNHMFTNNHC FSSAADTKNV EVWFNYQRTG
CGTGTTNTTV KVNGDQLLAT DYALDYTLFT VQEFEKIKQF GHFGLDANAQ IQGERIYIPQ
HGAGNPKELA IESDLNSNGL CQIDQTVTAG RGSNTDMGYK CDTTGGSSGS PVLSAKNNNV
IALHHYGNST QCTTKLNRGT RIELIWPKVA THFGGVLPVG DNGNTGNNPP VAQITTQCTE
LTCRFDSSGS SDSDGNIVAT AWDFGDGTTS TTAGLVTHTY QQAGKYNVSL VVTDNDNAQD
SAVVEVTVTA TGNQAPVADF TYSANGLAVN FTDASTDDSG VIGYLWAFGD GNSSQVQNPS
HAYVAAGTYP VTLTVTDAQG EQSTKSSSVV VTDSNCNVGA WDSSAVYLTG DQASQNGSVY
EAKWWTQAQS PADYSSTWAV WKWLRNCN
//
