ID U1JNL0_9GAMM Unreviewed; 580 AA.
AC U1JNL0;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE RecName: Full=PKD domain-containing protein {ECO:0008006|Google:ProtNLM};
GN ORFNames=PCIT_10479 {ECO:0000313|EMBL:ERG18592.1};
OS Pseudoalteromonas citrea DSM 8771.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Alteromonadales;
OC Pseudoalteromonadaceae; Pseudoalteromonas.
OX NCBI_TaxID=1117314 {ECO:0000313|EMBL:ERG18592.1, ECO:0000313|Proteomes:UP000016487};
RN [1] {ECO:0000313|EMBL:ERG18592.1, ECO:0000313|Proteomes:UP000016487}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=DSM 8771 {ECO:0000313|Proteomes:UP000016487};
RX PubMed=22535931; DOI=10.1128/JB.00265-12;
RA Xie B.B., Shu Y.L., Qin Q.L., Rong J.C., Zhang X.Y., Chen X.L., Shi M.,
RA He H.L., Zhou B.C., Zhang Y.Z.;
RT "Genome sequences of type strains of seven species of the marine bacterium
RT Pseudoalteromonas.";
RL J. Bacteriol. 194:2746-2747(2012).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ERG18592.1}.
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DR EMBL; AHBZ02000127; ERG18592.1; -; Genomic_DNA.
DR AlphaFoldDB; U1JNL0; -.
DR STRING; 1117314.PCIT_10479; -.
DR eggNOG; COG3291; Bacteria.
DR eggNOG; COG5297; Bacteria.
DR Proteomes; UP000016487; Unassembled WGS sequence.
DR GO; GO:0004553; F:hydrolase activity, hydrolyzing O-glycosyl compounds; IEA:InterPro.
DR GO; GO:0030247; F:polysaccharide binding; IEA:UniProtKB-UniRule.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:InterPro.
DR CDD; cd00146; PKD; 2.
DR Gene3D; 2.60.40.290; -; 2.
DR Gene3D; 2.60.40.10; Immunoglobulins; 2.
DR Gene3D; 2.40.128.110; Lipid/polyisoprenoid-binding, YceI-like; 1.
DR InterPro; IPR001919; CBD2.
DR InterPro; IPR008965; CBM2/CBM3_carb-bd_dom_sf.
DR InterPro; IPR012291; CBM2_carb-bd_dom_sf.
DR InterPro; IPR013783; Ig-like_fold.
DR InterPro; IPR007372; Lipid/polyisoprenoid-bd_YceI.
DR InterPro; IPR022409; PKD/Chitinase_dom.
DR InterPro; IPR000601; PKD_dom.
DR InterPro; IPR035986; PKD_dom_sf.
DR InterPro; IPR036761; TTHA0802/YceI-like_sf.
DR Pfam; PF00553; CBM_2; 2.
DR Pfam; PF18911; PKD_4; 2.
DR Pfam; PF04264; YceI; 1.
DR SMART; SM00637; CBD_II; 2.
DR SMART; SM00089; PKD; 2.
DR SMART; SM00867; YceI; 1.
DR SUPFAM; SSF49384; Carbohydrate-binding domain; 2.
DR SUPFAM; SSF49299; PKD domain; 2.
DR SUPFAM; SSF101874; YceI-like; 1.
DR PROSITE; PS51173; CBM2; 2.
DR PROSITE; PS50093; PKD; 2.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000016487}.
FT DOMAIN 7..113
FT /note="CBM2"
FT /evidence="ECO:0000259|PROSITE:PS51173"
FT DOMAIN 120..186
FT /note="PKD"
FT /evidence="ECO:0000259|PROSITE:PS50093"
FT DOMAIN 203..309
FT /note="CBM2"
FT /evidence="ECO:0000259|PROSITE:PS51173"
FT DOMAIN 316..402
FT /note="PKD"
FT /evidence="ECO:0000259|PROSITE:PS50093"
SQ SEQUENCE 580 AA; 63183 MW; FEA12DF79AC164DD CRC64;
MALGHSISSL AAQCEFKVKN EWQSGYTAEV IVHNDTDTPI SEWEVGLEFN HGESINNAWR
VKLDGNNPYQ FKNLNWNSNI NPNSSQSFGF NVNKSDGQNA IEPRLFGICD SGSHTDDDEV
KVEITASQTQ GTAPATIRFS SEIKNSPSTN LSYLWSFGDG HSSNEVNPQH IYEQAGSYQV
SFNINDGTND YPASPIELTI GEPEPESAHC SFKVEQEWNS GFRAKVTITN TENVAISNWK
VLMAFADDTK LTGVWHGKHS GNNPYEIINE NYNGTINPGQ SLDFGFNAQK AQENDAPTTP
SMGGLCNLDD TVNHAPSAIA SASVTTGERP LTVNFDGSKS SDQDGDELTY SWDFGNGNTS
NEATPKYIFD EKGLFAVTLT VNDGVNSTIS EPLSINVSEP DVTPINKPLV LNPQSSRLHF
VSTKKQHVVE AHTFNTMSGS ISTEGDARLS VDLTSVDTGN DTRDTRMKAY LFDTSVFQKA
EVLLSVDYSA VMALPIGSAE KQSISATVDL KGVIVEVNAD IIIRRLTNDK ILVQSQKPIL
LNATDFALES GIETLKTLAS LSVISYAVPV SFNLVFEAQQ
//
