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Database: UniProt
Entry: U1M3D7_ASCSU
LinkDB: U1M3D7_ASCSU
Original site: U1M3D7_ASCSU 
ID   U1M3D7_ASCSU            Unreviewed;       588 AA.
AC   U1M3D7;
DT   13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2013, sequence version 1.
DT   10-MAY-2017, entry version 17.
DE   SubName: Full=Cyclic nucleotide-gated cation channel beta-1 {ECO:0000313|EMBL:ERG83679.1};
GN   ORFNames=ASU_06626 {ECO:0000313|EMBL:ERG83679.1};
OS   Ascaris suum (Pig roundworm) (Ascaris lumbricoides).
OC   Eukaryota; Metazoa; Ecdysozoa; Nematoda; Chromadorea; Ascaridida;
OC   Ascaridoidea; Ascarididae; Ascaris.
OX   NCBI_TaxID=6253 {ECO:0000313|EMBL:ERG83679.1, ECO:0000313|Proteomes:UP000017900};
RN   [1] {ECO:0000313|EMBL:ERG83679.1, ECO:0000313|Proteomes:UP000017900}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   TISSUE=Sperm {ECO:0000313|EMBL:ERG83679.1};
RX   PubMed=21685128; DOI=10.1101/gr.121426.111;
RA   Wang J., Czech B., Crunk A., Wallace A., Mitreva M., Hannon G.J.,
RA   Davis R.E.;
RT   "Deep small RNA sequencing from the nematode Ascaris reveals
RT   conservation, functional diversification, and novel developmental
RT   profiles.";
RL   Genome Res. 21:1462-1477(2011).
RN   [2] {ECO:0000313|EMBL:ERG83679.1, ECO:0000313|Proteomes:UP000017900}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   TISSUE=Sperm {ECO:0000313|EMBL:ERG83679.1};
RX   PubMed=23123092; DOI=10.1016/j.devcel.2012.09.020;
RA   Wang J., Mitreva M., Berriman M., Thorne A., Magrini V.,
RA   Koutsovoulos G., Kumar S., Blaxter M.L., Davis R.E.;
RT   "Silencing of germline-expressed genes by DNA elimination in somatic
RT   cells.";
RL   Dev. Cell 23:1072-1080(2012).
CC   -!- CAUTION: The sequence shown here is derived from an
CC       EMBL/GenBank/DDBJ whole genome shotgun (WGS) entry which is
CC       preliminary data. {ECO:0000313|EMBL:ERG83679.1}.
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DR   EMBL; AEUI02000201; ERG83679.1; -; Genomic_DNA.
DR   Proteomes; UP000017900; Unassembled WGS sequence.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005216; F:ion channel activity; IEA:InterPro.
DR   Gene3D; 2.60.120.10; -; 1.
DR   InterPro; IPR018490; cNMP-bd-like.
DR   InterPro; IPR018488; cNMP-bd_CS.
DR   InterPro; IPR000595; cNMP-bd_dom.
DR   InterPro; IPR005821; Ion_trans_dom.
DR   InterPro; IPR014710; RmlC-like_jellyroll.
DR   Pfam; PF00027; cNMP_binding; 1.
DR   Pfam; PF00520; Ion_trans; 1.
DR   SMART; SM00100; cNMP; 1.
DR   SUPFAM; SSF51206; SSF51206; 1.
DR   PROSITE; PS00888; CNMP_BINDING_1; 1.
DR   PROSITE; PS00889; CNMP_BINDING_2; 1.
DR   PROSITE; PS50042; CNMP_BINDING_3; 1.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000017900};
KW   Ion transport {ECO:0000256|SAAS:SAAS00502700};
KW   Membrane {ECO:0000256|SAAS:SAAS00502630, ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000017900};
KW   Transmembrane {ECO:0000256|SAAS:SAAS00137614,
KW   ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAAS:SAAS00137754,
KW   ECO:0000256|SAM:Phobius}; Transport {ECO:0000256|SAAS:SAAS00502637}.
FT   TRANSMEM     61     81       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     93    114       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    137    158       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    202    223       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    274    295       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      378    482       Cyclic nucleotide-binding.
FT                                {ECO:0000259|PROSITE:PS50042}.
SQ   SEQUENCE   588 AA;  67728 MW;  28A621F670E9CBE2 CRC64;
     MEREVTPDLV SVLDGSVAPT TQHRPSLMSL IGLQRPTADT GDAAESKSWL PSSIDPHSRK
     YLVWLSIVVV AFLYNAFGIP LRSTYPYQTE SNLPYWLTAD YTADMIYILD LFIVKPRLRF
     MKGGIAVKER KETAKHYLMS MTFKLDLLSI APLDVLYIWT GPIAAWRIVR LCKLLSFWQL
     FNLLDNSFSN PYIIRITKTL GYMIYIIHCN SCIYYLLSAW QAFGQIAYRM NNKWYLNKWV
     YNNQGNAYVR CFYFTAAVAT STGNNPAPTN VIEYVYMTFS WMMGVFVFAL LLGQIRDIVS
     NANRNREQYR QTMDMCLSEC KRLQLPKEIV DRVRDWFIYT WHRQKTLDEK KLIEKLPLKL
     QTDLALSVHY NTLSKVQLFQ DCDRALLREL VLKLRPVIFL PGDMICKKGD VGKEMYIVND
     GILQVVGGDH NEKVFAELTE GSVFGEISLL AIGGNNRRTA NIRSKGYSTL FVLSKEDLND
     VIKDYPEAQQ LLRRKARQML SNDAKTKQEN DKGEQKTLEE RCRISTRLST PRMLDTVVKV
     LPENSVTGQQ LRSAIEMRPS RIQRIGTLPE SFPDDESDAE VAKVFENE
//
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