ID U1YCK0_9BURK Unreviewed; 294 AA.
AC U1YCK0;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 27-MAR-2024, entry version 40.
DE RecName: Full=HTH lysR-type domain-containing protein {ECO:0000259|PROSITE:PS50931};
GN ORFNames=N879_10955 {ECO:0000313|EMBL:ERI32808.1};
OS Alcaligenes sp. EGD-AK7.
OC Bacteria; Pseudomonadota; Betaproteobacteria; Burkholderiales;
OC Alcaligenaceae; Alcaligenes.
OX NCBI_TaxID=1386079 {ECO:0000313|EMBL:ERI32808.1, ECO:0000313|Proteomes:UP000016497};
RN [1] {ECO:0000313|EMBL:ERI32808.1, ECO:0000313|Proteomes:UP000016497}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=EGD-AK7 {ECO:0000313|EMBL:ERI32808.1};
RX PubMed=24407646;
RA Sagarkar S., Bhardwaj P., Yadav T.C., Qureshi A., Khardenavis A.,
RA Purohit H.J., Kapley A.;
RT "Draft genome sequence of atrazine-utilizing bacteria isolated from Indian
RT agricultural soil.";
RL Genome Announc. 2:e01149-13(2014).
CC -!- SIMILARITY: Belongs to the LysR transcriptional regulatory family.
CC {ECO:0000256|ARBA:ARBA00009437}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ERI32808.1}.
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DR EMBL; AVOG02000034; ERI32808.1; -; Genomic_DNA.
DR RefSeq; WP_009460171.1; NZ_AVOG02000034.1.
DR AlphaFoldDB; U1YCK0; -.
DR PATRIC; fig|1386079.3.peg.2127; -.
DR OrthoDB; 8849678at2; -.
DR Proteomes; UP000016497; Unassembled WGS sequence.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR Gene3D; 3.40.190.290; -; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR005119; LysR_subst-bd.
DR InterPro; IPR000847; Tscrpt_reg_HTH_LysR.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR InterPro; IPR036390; WH_DNA-bd_sf.
DR PANTHER; PTHR30427; TRANSCRIPTIONAL ACTIVATOR PROTEIN LYSR; 1.
DR PANTHER; PTHR30427:SF1; TRANSCRIPTIONAL ACTIVATOR PROTEIN LYSR; 1.
DR Pfam; PF00126; HTH_1; 1.
DR Pfam; PF03466; LysR_substrate; 1.
DR PRINTS; PR00039; HTHLYSR.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF46785; Winged helix' DNA-binding domain; 1.
DR PROSITE; PS50931; HTH_LYSR; 1.
PE 3: Inferred from homology;
KW Reference proteome {ECO:0000313|Proteomes:UP000016497}.
FT DOMAIN 1..58
FT /note="HTH lysR-type"
FT /evidence="ECO:0000259|PROSITE:PS50931"
SQ SEQUENCE 294 AA; 32762 MW; 0AB47EF5AEC4E49B CRC64;
MRWRHVEIFD AICRGGSLTQ AAQLLHISQP AASKMLATAE MQLGFRLFDR VRGRLIPTRE
ASILAPYVAR LHQNLDDVSR LARNLRSHHE GLWRIGSSPA FGLELLPVAL SRCRRAHPAM
SFELRTHHSG ELLQALETRD LDMVMSFDQG ESSGVQQQVL AHTELVHVTL PGVAPLRHWE
EMAERAFIVL DADDPVGAMV EDLLQSYVPD VAPFMRVQTH YVACGLVLQQ VGEALVDLVT
ARAMQGRGLA IHRLPEPLLI PVSILTAHDD AGSGSRERVL DHIRQALLEC RFPD
//
