ID U2JSA4_PORGN Unreviewed; 715 AA.
AC U2JSA4;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 27-MAR-2024, entry version 32.
DE RecName: Full=methylmalonyl-CoA mutase {ECO:0000256|ARBA:ARBA00012398};
DE EC=5.4.99.2 {ECO:0000256|ARBA:ARBA00012398};
GN ORFNames=HMPREF1989_02085 {ECO:0000313|EMBL:ERJ82912.1};
OS Porphyromonas gingivalis F0566.
OC Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Porphyromonadaceae;
OC Porphyromonas.
OX NCBI_TaxID=1321822 {ECO:0000313|EMBL:ERJ82912.1, ECO:0000313|Proteomes:UP000016609};
RN [1] {ECO:0000313|EMBL:ERJ82912.1, ECO:0000313|Proteomes:UP000016609}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=F0566 {ECO:0000313|EMBL:ERJ82912.1,
RC ECO:0000313|Proteomes:UP000016609};
RA Weinstock G., Sodergren E., Wylie T., Fulton L., Fulton R., Fronick C.,
RA O'Laughlin M., Godfrey J., Miner T., Herter B., Appelbaum E., Cordes M.,
RA Lek S., Wollam A., Pepin K.H., Palsikar V.B., Mitreva M., Wilson R.K.;
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=adenosylcob(III)alamin; Xref=ChEBI:CHEBI:18408;
CC Evidence={ECO:0000256|ARBA:ARBA00001922};
CC -!- SIMILARITY: Belongs to the methylmalonyl-CoA mutase family.
CC {ECO:0000256|ARBA:ARBA00008465}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ERJ82912.1}.
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DR EMBL; AWVD01000198; ERJ82912.1; -; Genomic_DNA.
DR RefSeq; WP_005875477.1; NZ_KI259995.1.
DR AlphaFoldDB; U2JSA4; -.
DR SMR; U2JSA4; -.
DR PATRIC; fig|1321822.3.peg.1759; -.
DR HOGENOM; CLU_009523_3_1_10; -.
DR Proteomes; UP000016609; Unassembled WGS sequence.
DR GO; GO:0031419; F:cobalamin binding; IEA:UniProtKB-KW.
DR GO; GO:0046872; F:metal ion binding; IEA:InterPro.
DR GO; GO:0004494; F:methylmalonyl-CoA mutase activity; IEA:InterPro.
DR CDD; cd02071; MM_CoA_mut_B12_BD; 1.
DR CDD; cd03679; MM_CoA_mutase_alpha_like; 1.
DR Gene3D; 3.40.50.280; Cobalamin-binding domain; 1.
DR Gene3D; 3.20.20.240; Methylmalonyl-CoA mutase; 1.
DR InterPro; IPR006159; Acid_CoA_mut_C.
DR InterPro; IPR016176; Cbl-dep_enz_cat.
DR InterPro; IPR006158; Cobalamin-bd.
DR InterPro; IPR036724; Cobalamin-bd_sf.
DR InterPro; IPR006099; MeMalonylCoA_mutase_a/b_cat.
DR InterPro; IPR006098; MMCoA_mutase_a_cat.
DR NCBIfam; TIGR00640; acid_CoA_mut_C; 1.
DR NCBIfam; TIGR00641; acid_CoA_mut_N; 1.
DR PANTHER; PTHR48101:SF4; METHYLMALONYL-COA MUTASE, MITOCHONDRIAL; 1.
DR PANTHER; PTHR48101; METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED; 1.
DR Pfam; PF02310; B12-binding; 1.
DR Pfam; PF01642; MM_CoA_mutase; 1.
DR SUPFAM; SSF52242; Cobalamin (vitamin B12)-binding domain; 1.
DR SUPFAM; SSF51703; Cobalamin (vitamin B12)-dependent enzymes; 1.
DR PROSITE; PS51332; B12_BINDING; 1.
DR PROSITE; PS00544; METMALONYL_COA_MUTASE; 1.
PE 3: Inferred from homology;
KW Cobalamin {ECO:0000256|ARBA:ARBA00022628};
KW Cobalt {ECO:0000256|ARBA:ARBA00023285};
KW Isomerase {ECO:0000256|ARBA:ARBA00023235};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723}.
FT DOMAIN 587..715
FT /note="B12-binding"
FT /evidence="ECO:0000259|PROSITE:PS51332"
SQ SEQUENCE 715 AA; 78703 MW; 766FDC92E13FBEB4 CRC64;
MKPNYKDIDI KSAGFVAKDA TRWAEEKGIV ADWRTPEQIM VKPLYTKDDL EGMEHLDYVS
GLPPFLRGPY SGMYPMRPWT IRQYAGFSTA EESNAFYRRN LASGQKGLSV AFDLATHRGY
DADHSRVVGD VGKAGVSICS LEDMKVLFDG IPLSKMSVSM TMNGAVLPIL AFYINAGLEQ
GAKLEEMAGT IQNDILKEFM VRNTYIYPPE FSMRIIADIF EYTSQNMPKF NSISISGYHM
QEAGATADIE MAYTLADGMQ YLKAGIDAGI DVDAFAPRLS FFWAIGVNHF MEIAKMRAAR
LLWAKIVKSF GAKNPKSLAL RTHSQTSGWS LTEQDPFNNV GRTCIEAMAA ALGHTQSLHT
NALDEAIALP TDFSARIARN TQIYIQEETL VCKEIDPWGG SYYVESLTNE LVHKAWTLIK
EVQEMGGMAK AIETGLPKLR IEEAAARTQA RIDSHQQVIV GVNKYRLPKE DPIDILEIDN
TAVRKQQIER LNDLRSHRDE KAVQEALEAI TKCVETKEGN LLDLAVKAAG LRASLGEISD
ACEKVVGRYK AVIRTISGVY SSESGEDKDF AHAKELAEKF AKKEGRQPRI MIAKMGQDGH
DRGAKVVATG YADCGFDVDM GPLFQTPEEA ARQAVENDVH VMGVSSLAAG HKTLIPQVIA
ELEKLGRPDI LVTAGGVIPA QDYDFLYQAG VAAIFGPGTP VAYSAAKVLE ILLEE
//