GenomeNet

Database: UniProt
Entry: U2LHY4_9FIRM
LinkDB: U2LHY4_9FIRM
Original site: U2LHY4_9FIRM 
ID   U2LHY4_9FIRM            Unreviewed;       592 AA.
AC   U2LHY4;
DT   13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT   13-NOV-2013, sequence version 1.
DT   27-MAR-2024, entry version 31.
DE   SubName: Full=Putative fibronectin-binding protein {ECO:0000313|EMBL:ERJ86713.1};
DE   Flags: Fragment;
GN   ORFNames=RUMCAL_03463 {ECO:0000313|EMBL:ERJ86713.1};
OS   Ruminococcus callidus ATCC 27760.
OC   Bacteria; Bacillota; Clostridia; Eubacteriales; Oscillospiraceae;
OC   Ruminococcus.
OX   NCBI_TaxID=411473 {ECO:0000313|EMBL:ERJ86713.1, ECO:0000313|Proteomes:UP000016662};
RN   [1] {ECO:0000313|EMBL:ERJ86713.1, ECO:0000313|Proteomes:UP000016662}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=ATCC 27760 {ECO:0000313|EMBL:ERJ86713.1,
RC   ECO:0000313|Proteomes:UP000016662};
RA   Weinstock G., Sodergren E., Wylie T., Fulton L., Fulton R., Fronick C.,
RA   O'Laughlin M., Godfrey J., Miner T., Herter B., Appelbaum E., Cordes M.,
RA   Lek S., Wollam A., Pepin K.H., Palsikar V.B., Mitreva M., Wilson R.K.;
RL   Submitted (JUL-2013) to the EMBL/GenBank/DDBJ databases.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:ERJ86713.1}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; AWVF01000470; ERJ86713.1; -; Genomic_DNA.
DR   AlphaFoldDB; U2LHY4; -.
DR   STRING; 411473.RUMCAL_03463; -.
DR   PATRIC; fig|411473.3.peg.2900; -.
DR   eggNOG; COG1293; Bacteria.
DR   HOGENOM; CLU_022481_2_1_9; -.
DR   Proteomes; UP000016662; Unassembled WGS sequence.
DR   GO; GO:0000049; F:tRNA binding; IEA:UniProtKB-KW.
DR   GO; GO:0072344; P:rescue of stalled ribosome; IEA:InterPro.
DR   Gene3D; 2.30.310.10; ibrinogen binding protein from staphylococcus aureus domain; 1.
DR   HAMAP; MF_00844_B; RqcH_B; 1.
DR   InterPro; IPR008532; NFACT_RNA-bd.
DR   InterPro; IPR043682; RqcH_bacterial.
DR   PANTHER; PTHR15239; NUCLEAR EXPORT MEDIATOR FACTOR NEMF; 1.
DR   PANTHER; PTHR15239:SF6; RIBOSOME QUALITY CONTROL COMPLEX SUBUNIT NEMF; 1.
DR   Pfam; PF05670; NFACT-R_1; 1.
DR   Pfam; PF18297; NFACT-R_2; 1.
DR   Pfam; PF05833; NFACT_N; 1.
PE   3: Inferred from homology;
KW   Protein biosynthesis {ECO:0000256|ARBA:ARBA00022917};
KW   RNA-binding {ECO:0000256|ARBA:ARBA00022884};
KW   tRNA-binding {ECO:0000256|ARBA:ARBA00022555}.
FT   DOMAIN          480..579
FT                   /note="NFACT RNA-binding"
FT                   /evidence="ECO:0000259|Pfam:PF05670"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:ERJ86713.1"
SQ   SEQUENCE   592 AA;  66772 MW;  115B3A4348212410 CRC64;
     RKVSGDSPPA VRKDESNMAL DGAYLHAVRQ ELLPLLDSRI EKIHQPTREE LLVAFRGRTG
     GAKVLFSCAA DRARVHLTQV TVENPKAPPM FCMLLRKRLG NGKLLAIRQD GLERVLYFDF
     SCVNELGDIV QLTLAIEIMG RYSNLILIDE TGKVIDSMKR VDATMSSKRL VLPGLPYEMP
     PRDERLNFLQ AAPEQMLAVL STKTGELSKA LLQTFEGVSP VLVREWAYYT GKGQPCRAES
     LTNDQKDRLC YTIGRTREIL EQGEAVYTIV STREGQPKDF SFLPLHQYGT LMVTKVMPSA
     CALLDEFFAS RDHMARLKQR ANDLFHLLLH ATERIQRRIV SQSEELEACG EKDTDRRKAD
     LISANLYRLH KGDTEAVLED FYEPDCPTVH IALDARLTPP QNAQKYYQAY KKACTAEKIL
     TEQIAKGREE LTYLDSVLDA LSRAETENDL EQLRAELAEQ GYLRLLRRKG KPPKSLPPME
     FTASDGTRIL VGRNNRQNDQ LTLKTANKND IWLHTQNIPG SHVILETGGR EPSQQVLEEA
     AQLAAYHSKA RDSAQVPVDY CAVRYVKKPA GAKPGMVIFT NQHTLYVKPE QR
//
DBGET integrated database retrieval system