ID U2PRS8_9CLOT Unreviewed; 581 AA.
AC U2PRS8;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 27-MAR-2024, entry version 51.
DE SubName: Full=Sigma-54 dependent transcriptional regulator {ECO:0000313|EMBL:ERK29145.1};
GN ORFNames=CINTURNW_3667 {ECO:0000313|EMBL:ERK29145.1};
OS Clostridium intestinale URNW.
OC Bacteria; Bacillota; Clostridia; Eubacteriales; Clostridiaceae;
OC Clostridium.
OX NCBI_TaxID=1294142 {ECO:0000313|EMBL:ERK29145.1, ECO:0000313|Proteomes:UP000016721};
RN [1] {ECO:0000313|EMBL:ERK29145.1, ECO:0000313|Proteomes:UP000016721}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=URNW {ECO:0000313|EMBL:ERK29145.1,
RC ECO:0000313|Proteomes:UP000016721};
RX PubMed=24136853;
RA Lal S., Ramachandran U., Zhang X., Sparling R., Levin D.B.;
RT "Draft Genome Sequence of the Hydrogen- and Ethanol-Producing Bacterium
RT Clostridium intestinale Strain URNW.";
RL Genome Announc. 1:e00871-13(2013).
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ERK29145.1}.
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DR EMBL; APJA01000022; ERK29145.1; -; Genomic_DNA.
DR RefSeq; WP_021803601.1; NZ_KI273145.1.
DR AlphaFoldDB; U2PRS8; -.
DR STRING; 1294142.CINTURNW_3667; -.
DR PATRIC; fig|1294142.3.peg.3831; -.
DR eggNOG; COG3829; Bacteria.
DR HOGENOM; CLU_000445_8_1_9; -.
DR OrthoDB; 9803970at2; -.
DR Proteomes; UP000016721; Unassembled WGS sequence.
DR GO; GO:0005524; F:ATP binding; IEA:UniProtKB-KW.
DR GO; GO:0016887; F:ATP hydrolysis activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR GO; GO:0006355; P:regulation of DNA-templated transcription; IEA:InterPro.
DR CDD; cd00009; AAA; 1.
DR Gene3D; 1.10.8.60; -; 1.
DR Gene3D; 3.30.450.40; -; 1.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR Gene3D; 3.40.50.300; P-loop containing nucleotide triphosphate hydrolases; 1.
DR InterPro; IPR003593; AAA+_ATPase.
DR InterPro; IPR029016; GAF-like_dom_sf.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR002197; HTH_Fis.
DR InterPro; IPR027417; P-loop_NTPase.
DR InterPro; IPR002078; Sigma_54_int.
DR InterPro; IPR025662; Sigma_54_int_dom_ATP-bd_1.
DR InterPro; IPR025944; Sigma_54_int_dom_CS.
DR PANTHER; PTHR32071:SF119; SIGMA-54 INTERACTING PROTEIN; 1.
DR PANTHER; PTHR32071; TRANSCRIPTIONAL REGULATORY PROTEIN; 1.
DR Pfam; PF02954; HTH_8; 1.
DR Pfam; PF00158; Sigma54_activat; 1.
DR SMART; SM00382; AAA; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF52540; P-loop containing nucleoside triphosphate hydrolases; 1.
DR PROSITE; PS00675; SIGMA54_INTERACT_1; 1.
DR PROSITE; PS00688; SIGMA54_INTERACT_3; 1.
DR PROSITE; PS50045; SIGMA54_INTERACT_4; 1.
PE 4: Predicted;
KW ATP-binding {ECO:0000256|ARBA:ARBA00022840};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Nucleotide-binding {ECO:0000256|ARBA:ARBA00022741};
KW Reference proteome {ECO:0000313|Proteomes:UP000016721};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 271..501
FT /note="Sigma-54 factor interaction"
FT /evidence="ECO:0000259|PROSITE:PS50045"
SQ SEQUENCE 581 AA; 65869 MW; 0A939F4453DF1A44 CRC64;
MKESLLKPIQ STVLKYAEVI ANVIKVDVEI VDSNLNTIAG TGIFTSNING DNKGVVYKHV
LATGKHQIIE NPREAEICRL CNQKNECLEM MEISTPIIFQ KEIIGVIGLV CTTIEQKNYL
SDNLDSHLEF LYKISELISA KIYEFKGNER NVSYINLLKQ VVNSVDNGVI IINSESKIVE
MNSKAMKKLE LTPSDINGSI QLKLLEGNIL EEESYKVRIN GKKYNLVGSL IPLEDTLEDY
NKMLIFNMLK DVNTKAYKIT SDNKIVDLEA IIGEGKAMQG IKDKIRKIAN TKSTVFVTGE
SGTGKELIAR AIHAESDRRN NPFIGINCAA IPDTLLESEL FGYVKGAFSG ANPNGRIGKF
ELANKGVIFL DEVGDMPLYL QAKLLRVLQE RTLVRIGSNE LVNLDIRVVA ATNKDLRQMI
KENKFREDLY YRLNVIPIEI PALRERREDF KLILNTLIDK YNKIFDKYVH TVNKDAYEKL
ISYSWPGNIR ELENIVELLI NLSDSRGIIE KEMLPHTILG NSKVETFHEE EEIRFLKDIE
REYILKALDK YGYDTNGKKM VAEKLGIGIA TIYRKIGSFK E
//
