ID U3FMQ2_CALJA Unreviewed; 317 AA.
AC U3FMQ2; F7ED25;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 13-NOV-2013, sequence version 1.
DT 27-MAR-2024, entry version 30.
DE SubName: Full=SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1-related {ECO:0000313|EMBL:JAB46056.1};
GN Name=HMG20B {ECO:0000313|EMBL:JAB46056.1,
GN ECO:0000313|Ensembl:ENSCJAP00000006357.5};
OS Callithrix jacchus (White-tufted-ear marmoset).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae;
OC Callitrichinae; Callithrix; Callithrix.
OX NCBI_TaxID=9483 {ECO:0000313|EMBL:JAB46056.1};
RN [1] {ECO:0000313|Ensembl:ENSCJAP00000006357.5}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RA Warren W., Ye L., Minx P., Worley K., Gibbs R., Wilson R.K.;
RL Submitted (MAR-2009) to the EMBL/GenBank/DDBJ databases.
RN [2] {ECO:0000313|EMBL:JAB46056.1}
RP NUCLEOTIDE SEQUENCE.
RC TISSUE=Cerebellum {ECO:0000313|EMBL:JAB46056.1}, Cerebral cortex
RC {ECO:0000313|EMBL:JAB24034.1}, Hippocampus
RC {ECO:0000313|EMBL:JAB14792.1}, and Skeletal muscle
RC {ECO:0000313|EMBL:JAB34491.1};
RX PubMed=25243066; DOI=10.1186/2047-217X-3-14;
RA Maudhoo M.D., Ren D., Gradnigo J.S., Gibbs R.M., Lubker A.C.,
RA Moriyama E.N., French J.A., Norgren R.B.Jr.;
RT "De novo assembly of the common marmoset transcriptome from NextGen mRNA
RT sequences.";
RL Gigascience 3:14-14(2014).
RN [3] {ECO:0000313|Ensembl:ENSCJAP00000006357.5}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (NOV-2023) to UniProtKB.
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DR EMBL; GAMS01008344; JAB14792.1; -; mRNA.
DR EMBL; GAMR01009898; JAB24034.1; -; mRNA.
DR EMBL; GAMQ01007360; JAB34491.1; -; mRNA.
DR EMBL; GAMP01006699; JAB46056.1; -; mRNA.
DR STRING; 9483.ENSCJAP00000006357; -.
DR Ensembl; ENSCJAT00000006710.5; ENSCJAP00000006357.5; ENSCJAG00000003488.6.
DR GeneTree; ENSGT00940000161213; -.
DR HOGENOM; CLU_060006_1_0_1; -.
DR OMA; NIDRYMH; -.
DR OrthoDB; 37141at2759; -.
DR Proteomes; UP000008225; Chromosome 22.
DR Bgee; ENSCJAG00000003488; Expressed in testis and 6 other cell types or tissues.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-UniRule.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd22018; HMG-box_HMG20B; 1.
DR Gene3D; 1.10.30.10; High mobility group box domain; 1.
DR InterPro; IPR009071; HMG_box_dom.
DR InterPro; IPR036910; HMG_box_dom_sf.
DR PANTHER; PTHR46040; HIGH MOBILITY GROUP PROTEIN 2; 1.
DR PANTHER; PTHR46040:SF2; SWI_SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY E MEMBER 1-RELATED; 1.
DR Pfam; PF00505; HMG_box; 1.
DR PRINTS; PR00886; HIGHMOBLTY12.
DR SMART; SM00398; HMG; 1.
DR SUPFAM; SSF47095; HMG-box; 1.
DR PROSITE; PS50118; HMG_BOX_2; 1.
PE 2: Evidence at transcript level;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125, ECO:0000256|PROSITE-
KW ProRule:PRU00267};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242, ECO:0000256|PROSITE-
KW ProRule:PRU00267}; Reference proteome {ECO:0000313|Proteomes:UP000008225}.
FT DOMAIN 70..138
FT /note="HMG box"
FT /evidence="ECO:0000259|PROSITE:PS50118"
FT DNA_BIND 70..138
FT /note="HMG box"
FT /evidence="ECO:0000256|PROSITE-ProRule:PRU00267"
FT REGION 1..71
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 196..251
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 35..55
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 317 AA; 35843 MW; 33BE6A6440E6436C CRC64;
MSHGPKQPGA AAAPTGGKAP GQHGGFVVAV KQERGEGPRA GEKGSHEEEP VKKRGWPKGK
KRKKILPNGP KAPVTGYVRF LNERREQIRT RHPDLPFPEI TKMLGAEWSK LQPTEKQRYL
DEAEREKQQY MRELRAYQQS EAYKMCTEKM QEKKIKKEDS GSGLMNTLLN GHKGGDCDGF
STFDVPIFTE EFLDQNKARE AELRRLRKMN VAFEEQNAVL QRHTQSMSSA RERLEQELAL
EERRTLALQQ QLQAVRQALT ASFASLPVPG TGETPTLGTL DFYMARLHGA IERDPAQHEK
LIIRIKEILA QVASEHL
//
