ID U3KCQ9_FICAL Unreviewed; 887 AA.
AC U3KCQ9;
DT 13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT 29-SEP-2021, sequence version 2.
DT 24-JAN-2024, entry version 52.
DE SubName: Full=Trafficking kinesin protein 1 {ECO:0000313|Ensembl:ENSFALP00000012813.2};
GN Name=TRAK1 {ECO:0000313|Ensembl:ENSFALP00000012813.2};
OS Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis).
OC Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.
OX NCBI_TaxID=59894 {ECO:0000313|Ensembl:ENSFALP00000012813.2, ECO:0000313|Proteomes:UP000016665};
RN [1] {ECO:0000313|Ensembl:ENSFALP00000012813.2, ECO:0000313|Proteomes:UP000016665}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23103876; DOI=10.1038/nature11584;
RA Ellegren H., Smeds L., Burri R., Olason P.I., Backstrom N., Kawakami T.,
RA Kunstner A., Makinen H., Nadachowska-Brzyska K., Qvarnstrom A., Uebbing S.,
RA Wolf J.B.;
RT "The genomic landscape of species divergence in Ficedula flycatchers.";
RL Nature 491:756-760(2012).
RN [2] {ECO:0000313|Ensembl:ENSFALP00000012813.2}
RP IDENTIFICATION.
RG Ensembl;
RL Submitted (SEP-2023) to UniProtKB.
CC -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000256|ARBA:ARBA00004173}.
CC -!- SIMILARITY: Belongs to the milton family.
CC {ECO:0000256|ARBA:ARBA00007007}.
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DR AlphaFoldDB; U3KCQ9; -.
DR STRING; 59894.ENSFALP00000012813; -.
DR Ensembl; ENSFALT00000012863.2; ENSFALP00000012813.2; ENSFALG00000012274.2.
DR eggNOG; KOG4360; Eukaryota.
DR GeneTree; ENSGT00940000155697; -.
DR HOGENOM; CLU_013450_0_0_1; -.
DR Proteomes; UP000016665; Chromosome 2.
DR GO; GO:0005769; C:early endosome; IEA:UniProtKB-SubCell.
DR GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR InterPro; IPR006933; HAP1_N.
DR InterPro; IPR022154; TRAK1/2_C.
DR PANTHER; PTHR15751; TRAFFICKING KINESIN-BINDING PROTEIN; 1.
DR PANTHER; PTHR15751:SF11; TRAFFICKING KINESIN-BINDING PROTEIN 1; 1.
DR Pfam; PF04849; HAP1_N; 1.
DR Pfam; PF12448; Milton; 1.
DR SMART; SM01424; HAP1_N; 1.
DR SMART; SM01423; Milton; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW Mitochondrion {ECO:0000256|ARBA:ARBA00023128};
KW Reference proteome {ECO:0000313|Proteomes:UP000016665}.
FT DOMAIN 1..249
FT /note="HAP1 N-terminal"
FT /evidence="ECO:0000259|SMART:SM01424"
FT DOMAIN 310..479
FT /note="Trafficking kinesin-binding protein C-terminal"
FT /evidence="ECO:0000259|SMART:SM01423"
FT REGION 366..391
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 531..590
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 711..730
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COILED 8..63
FT /evidence="ECO:0000256|SAM:Coils"
FT COILED 106..249
FT /evidence="ECO:0000256|SAM:Coils"
FT COMPBIAS 533..576
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 887 AA; 98251 MW; 92B7B32D6DCC99B1 CRC64;
MTKTYNDIDA VTRLLEEKER DLELAARIGQ SLLKKNKSLT ERNDFLEEQV EHIREEVSQL
RHELSMKDEL LQFYTSAAEE SEPESVCSTP LKRNESSSSV QNYFHLDSLQ KKLKDLEEEN
VVLRSEACQL KTETITYEEK EQQLVNDCVK ELRDANIQIA NISEELAKKT EDAARQQEEI
THLLSQIVDL QKKAKACAVE NEELVQHLGA AKDAQRQLTA ELRELEDKYA ECMEMLHEAQ
EELKNLRNKT MPNAISRRYH SLGLFPMDSL AAEIEGSMRK ELHLDEPDSP DLAHQKRVFE
TVRNVNQVVK QRSMTPSPMN IPGSNQSSAM NSVISSCVST PRSSFYGGDI SNVMIDNKTN
SIILETESSD NGNEDRLKKP GTPGTPGSSD LETALRRLSL RRENYLSERK FFEEEQERKL
RELAEKGELH SGSVTPTESI MSLGTHSRFS EFTGYSGMSI SSRSYLPEKL QIVKPLEGSA
TLHHWQQLAQ PHLGGILDPR PGVVTKGFRT LDLDLDEVYC LNDYEEDETG DISYKGLTTS
TPVQHTETSG ERSQAQVTVS ESKNNPRQSQ AFTEEMQESA TDDDEGSVPH PGKCMSQTNS
TFTFTTCRIL HPSDELTRVT PSLNAAPTPA CGSISNLKGT PVATPCTPRR LSLAESFTNL
RESTTTMSTS LGLVWLLKER GISAAVYNPQ SWDRASRSTL LNTYSPKMAI IPSTPPNSPM
QTPSSSPPSF EFKCTSPPYD NFLASKPASS ILKEVRNKKN IRNSESQTDV SVSNLNLVDK
VRRFGIAKVV SSGQMSAPPL TDDQGPLLCG AQGPVRALVP GGLAPDGLRL GCPAVTSAIG
GIQLNTGIRR NRSFPTMVGS SMQMKGPTSL TSGILMGTKL PKQTSLR
//