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Database: UniProt
Entry: U3KCQ9_FICAL
LinkDB: U3KCQ9_FICAL
Original site: U3KCQ9_FICAL 
ID   U3KCQ9_FICAL            Unreviewed;       887 AA.
AC   U3KCQ9;
DT   13-NOV-2013, integrated into UniProtKB/TrEMBL.
DT   29-SEP-2021, sequence version 2.
DT   24-JAN-2024, entry version 52.
DE   SubName: Full=Trafficking kinesin protein 1 {ECO:0000313|Ensembl:ENSFALP00000012813.2};
GN   Name=TRAK1 {ECO:0000313|Ensembl:ENSFALP00000012813.2};
OS   Ficedula albicollis (Collared flycatcher) (Muscicapa albicollis).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
OC   Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda;
OC   Coelurosauria; Aves; Neognathae; Passeriformes; Muscicapidae; Ficedula.
OX   NCBI_TaxID=59894 {ECO:0000313|Ensembl:ENSFALP00000012813.2, ECO:0000313|Proteomes:UP000016665};
RN   [1] {ECO:0000313|Ensembl:ENSFALP00000012813.2, ECO:0000313|Proteomes:UP000016665}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=23103876; DOI=10.1038/nature11584;
RA   Ellegren H., Smeds L., Burri R., Olason P.I., Backstrom N., Kawakami T.,
RA   Kunstner A., Makinen H., Nadachowska-Brzyska K., Qvarnstrom A., Uebbing S.,
RA   Wolf J.B.;
RT   "The genomic landscape of species divergence in Ficedula flycatchers.";
RL   Nature 491:756-760(2012).
RN   [2] {ECO:0000313|Ensembl:ENSFALP00000012813.2}
RP   IDENTIFICATION.
RG   Ensembl;
RL   Submitted (SEP-2023) to UniProtKB.
CC   -!- SUBCELLULAR LOCATION: Mitochondrion {ECO:0000256|ARBA:ARBA00004173}.
CC   -!- SIMILARITY: Belongs to the milton family.
CC       {ECO:0000256|ARBA:ARBA00007007}.
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DR   AlphaFoldDB; U3KCQ9; -.
DR   STRING; 59894.ENSFALP00000012813; -.
DR   Ensembl; ENSFALT00000012863.2; ENSFALP00000012813.2; ENSFALG00000012274.2.
DR   eggNOG; KOG4360; Eukaryota.
DR   GeneTree; ENSGT00940000155697; -.
DR   HOGENOM; CLU_013450_0_0_1; -.
DR   Proteomes; UP000016665; Chromosome 2.
DR   GO; GO:0005769; C:early endosome; IEA:UniProtKB-SubCell.
DR   GO; GO:0005739; C:mitochondrion; IEA:UniProtKB-SubCell.
DR   InterPro; IPR006933; HAP1_N.
DR   InterPro; IPR022154; TRAK1/2_C.
DR   PANTHER; PTHR15751; TRAFFICKING KINESIN-BINDING PROTEIN; 1.
DR   PANTHER; PTHR15751:SF11; TRAFFICKING KINESIN-BINDING PROTEIN 1; 1.
DR   Pfam; PF04849; HAP1_N; 1.
DR   Pfam; PF12448; Milton; 1.
DR   SMART; SM01424; HAP1_N; 1.
DR   SMART; SM01423; Milton; 1.
PE   3: Inferred from homology;
KW   Coiled coil {ECO:0000256|ARBA:ARBA00023054, ECO:0000256|SAM:Coils};
KW   Mitochondrion {ECO:0000256|ARBA:ARBA00023128};
KW   Reference proteome {ECO:0000313|Proteomes:UP000016665}.
FT   DOMAIN          1..249
FT                   /note="HAP1 N-terminal"
FT                   /evidence="ECO:0000259|SMART:SM01424"
FT   DOMAIN          310..479
FT                   /note="Trafficking kinesin-binding protein C-terminal"
FT                   /evidence="ECO:0000259|SMART:SM01423"
FT   REGION          366..391
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          531..590
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   REGION          711..730
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COILED          8..63
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COILED          106..249
FT                   /evidence="ECO:0000256|SAM:Coils"
FT   COMPBIAS        533..576
FT                   /note="Polar residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   887 AA;  98251 MW;  92B7B32D6DCC99B1 CRC64;
     MTKTYNDIDA VTRLLEEKER DLELAARIGQ SLLKKNKSLT ERNDFLEEQV EHIREEVSQL
     RHELSMKDEL LQFYTSAAEE SEPESVCSTP LKRNESSSSV QNYFHLDSLQ KKLKDLEEEN
     VVLRSEACQL KTETITYEEK EQQLVNDCVK ELRDANIQIA NISEELAKKT EDAARQQEEI
     THLLSQIVDL QKKAKACAVE NEELVQHLGA AKDAQRQLTA ELRELEDKYA ECMEMLHEAQ
     EELKNLRNKT MPNAISRRYH SLGLFPMDSL AAEIEGSMRK ELHLDEPDSP DLAHQKRVFE
     TVRNVNQVVK QRSMTPSPMN IPGSNQSSAM NSVISSCVST PRSSFYGGDI SNVMIDNKTN
     SIILETESSD NGNEDRLKKP GTPGTPGSSD LETALRRLSL RRENYLSERK FFEEEQERKL
     RELAEKGELH SGSVTPTESI MSLGTHSRFS EFTGYSGMSI SSRSYLPEKL QIVKPLEGSA
     TLHHWQQLAQ PHLGGILDPR PGVVTKGFRT LDLDLDEVYC LNDYEEDETG DISYKGLTTS
     TPVQHTETSG ERSQAQVTVS ESKNNPRQSQ AFTEEMQESA TDDDEGSVPH PGKCMSQTNS
     TFTFTTCRIL HPSDELTRVT PSLNAAPTPA CGSISNLKGT PVATPCTPRR LSLAESFTNL
     RESTTTMSTS LGLVWLLKER GISAAVYNPQ SWDRASRSTL LNTYSPKMAI IPSTPPNSPM
     QTPSSSPPSF EFKCTSPPYD NFLASKPASS ILKEVRNKKN IRNSESQTDV SVSNLNLVDK
     VRRFGIAKVV SSGQMSAPPL TDDQGPLLCG AQGPVRALVP GGLAPDGLRL GCPAVTSAIG
     GIQLNTGIRR NRSFPTMVGS SMQMKGPTSL TSGILMGTKL PKQTSLR
//
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