ID U4K6N1_9VIBR Unreviewed; 272 AA.
AC U4K6N1;
DT 11-DEC-2013, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE SubName: Full=Putative Transcriptional regulator RpiR family {ECO:0000313|EMBL:CCO58251.1};
GN ORFNames=VIBNI_A2173 {ECO:0000313|EMBL:CCO58251.1};
OS Vibrio nigripulchritudo.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=28173 {ECO:0000313|EMBL:CCO58251.1, ECO:0000313|Proteomes:UP000016895};
RN [1] {ECO:0000313|EMBL:CCO58251.1, ECO:0000313|Proteomes:UP000016895}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SnF1 {ECO:0000313|Proteomes:UP000016895};
RX PubMed=23739050; DOI=10.1038/ismej.2013.90;
RA Goudenege D., Labreuche Y., Krin E., Ansquer D., Mangenot S., Calteau A.,
RA Medigue C., Mazel D., Polz M.F., Le Roux F.;
RT "Comparative genomics of pathogenic lineages of Vibrio nigripulchritudo
RT identifies virulence-associated traits.";
RL ISME J. 7:1985-1996(2013).
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DR EMBL; FO203526; CCO58251.1; -; Genomic_DNA.
DR RefSeq; WP_022551056.1; NC_022528.1.
DR AlphaFoldDB; U4K6N1; -.
DR STRING; 28173.VIBNI_A2173; -.
DR KEGG; vni:VIBNI_A2173; -.
DR PATRIC; fig|1260221.3.peg.2063; -.
DR eggNOG; COG1737; Bacteria.
DR OrthoDB; 9814005at2; -.
DR Proteomes; UP000016895; Chromosome 1.
DR GO; GO:0097367; F:carbohydrate derivative binding; IEA:InterPro.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:1901135; P:carbohydrate derivative metabolic process; IEA:InterPro.
DR CDD; cd05013; SIS_RpiR; 1.
DR Gene3D; 1.10.10.10; Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain; 1.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR000281; HTH_RpiR.
DR InterPro; IPR047640; RpiR-like.
DR InterPro; IPR035472; RpiR-like_SIS.
DR InterPro; IPR001347; SIS_dom.
DR InterPro; IPR046348; SIS_dom_sf.
DR InterPro; IPR036388; WH-like_DNA-bd_sf.
DR PANTHER; PTHR30514; GLUCOKINASE; 1.
DR PANTHER; PTHR30514:SF20; TRANSCRIPTIONAL REGULATOR-RELATED; 1.
DR Pfam; PF01418; HTH_6; 1.
DR Pfam; PF01380; SIS; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 1.
DR SUPFAM; SSF53697; SIS domain; 1.
DR PROSITE; PS51071; HTH_RPIR; 1.
DR PROSITE; PS51464; SIS; 1.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000016895}.
FT DOMAIN 8..84
FT /note="HTH rpiR-type"
FT /evidence="ECO:0000259|PROSITE:PS51071"
FT DOMAIN 138..272
FT /note="SIS"
FT /evidence="ECO:0000259|PROSITE:PS51464"
SQ SEQUENCE 272 AA; 29860 MW; B94491CBC00782A2 CRC64;
MKPATTLSEL QEDIRKEYGN LSKRLQQVGQ YLLDNPENVA FDTVAVIASN ADVPPSTLIR
FANALGFNGF NDMKQLYRQN MVEETSNYSE RVKLFKAMSP DDSQASTPIS QLHNFANANA
HALEQLANKI EENDLNNAIT LLKNAECLYV IGLRRSFSIA SYMVYALRHL GKRVVLIDGL
GGMYDEQLSM VTGKDAVVSI SFSPYAEETH NWVKAAREKG AKQVTLTDSQ VSPIAELSDV
NFVVNEANVG GFRGQSASLC LAQTLAVSLA SE
//
