ID U4K819_9VIBR Unreviewed; 289 AA.
AC U4K819;
DT 11-DEC-2013, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 1.
DT 27-MAR-2024, entry version 47.
DE SubName: Full=Putative N-acetylneuraminate lyase {ECO:0000313|EMBL:CCO58784.1};
DE EC=4.1.3.3 {ECO:0000313|EMBL:CCO58784.1};
GN ORFNames=VIBNI_A2737 {ECO:0000313|EMBL:CCO58784.1};
OS Vibrio nigripulchritudo.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=28173 {ECO:0000313|EMBL:CCO58784.1, ECO:0000313|Proteomes:UP000016895};
RN [1] {ECO:0000313|EMBL:CCO58784.1, ECO:0000313|Proteomes:UP000016895}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SnF1 {ECO:0000313|Proteomes:UP000016895};
RX PubMed=23739050; DOI=10.1038/ismej.2013.90;
RA Goudenege D., Labreuche Y., Krin E., Ansquer D., Mangenot S., Calteau A.,
RA Medigue C., Mazel D., Polz M.F., Le Roux F.;
RT "Comparative genomics of pathogenic lineages of Vibrio nigripulchritudo
RT identifies virulence-associated traits.";
RL ISME J. 7:1985-1996(2013).
CC -!- SIMILARITY: Belongs to the DapA family.
CC {ECO:0000256|PIRNR:PIRNR001365}.
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DR EMBL; FO203526; CCO58784.1; -; Genomic_DNA.
DR RefSeq; WP_022551430.1; NC_022528.1.
DR AlphaFoldDB; U4K819; -.
DR STRING; 28173.VIBNI_A2737; -.
DR KEGG; vni:VIBNI_A2737; -.
DR PATRIC; fig|1260221.3.peg.2606; -.
DR eggNOG; COG0329; Bacteria.
DR OrthoDB; 199953at2; -.
DR Proteomes; UP000016895; Chromosome 1.
DR GO; GO:0005737; C:cytoplasm; IEA:UniProtKB-KW.
DR GO; GO:0008747; F:N-acetylneuraminate lyase activity; IEA:UniProtKB-EC.
DR GO; GO:0005975; P:carbohydrate metabolic process; IEA:UniProtKB-KW.
DR Gene3D; 3.20.20.70; Aldolase class I; 1.
DR InterPro; IPR013785; Aldolase_TIM.
DR InterPro; IPR002220; DapA-like.
DR InterPro; IPR020625; Schiff_base-form_aldolases_AS.
DR PANTHER; PTHR42849; N-ACETYLNEURAMINATE LYASE; 1.
DR PANTHER; PTHR42849:SF1; N-ACETYLNEURAMINATE LYASE; 1.
DR Pfam; PF00701; DHDPS; 1.
DR PIRSF; PIRSF001365; DHDPS; 1.
DR PRINTS; PR00146; DHPICSNTHASE.
DR SMART; SM01130; DHDPS; 1.
DR SUPFAM; SSF51569; Aldolase; 1.
DR PROSITE; PS00666; DHDPS_2; 1.
PE 3: Inferred from homology;
KW Lyase {ECO:0000256|ARBA:ARBA00023239, ECO:0000256|PIRNR:PIRNR001365};
KW Reference proteome {ECO:0000313|Proteomes:UP000016895};
KW Schiff base {ECO:0000256|ARBA:ARBA00023270}.
FT ACT_SITE 132
FT /note="Proton donor/acceptor"
FT /evidence="ECO:0000256|PIRSR:PIRSR001365-1"
FT ACT_SITE 160
FT /note="Schiff-base intermediate with substrate"
FT /evidence="ECO:0000256|PIRSR:PIRSR001365-1"
FT BINDING 201
FT /ligand="pyruvate"
FT /ligand_id="ChEBI:CHEBI:15361"
FT /evidence="ECO:0000256|PIRSR:PIRSR001365-2"
SQ SEQUENCE 289 AA; 32669 MW; 6A53A18417BE8603 CRC64;
MEGIFVPLMT PFSADGELEY SKLDAMIEYH ISQGVHGFYV GGSSSECFMM SISERQKVLK
YVSQVVKKRV PVIAHVGAIA LTDVRLLIDT ALDENYDVIS AIPPFYYGFT KQEVTYYYQS
ILDYTDLPLL LYNIPGTTGV TFTHETLLNL LMMDNIIGIK HTTPDMFFIE RLRHLQQDSL
IFHGEDSMLV NGLQMGASGG IGTTYNLMPA QYVKLFEAMK QGDVDKAMAL QHQVNRVTEV
LLEVGLYQSI KFAMSEMGID YGHCREPFLP LSKEDKGRVM TCLERYGYL
//