ID U4K868_9VIBR Unreviewed; 316 AA.
AC U4K868;
DT 11-DEC-2013, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 1.
DT 27-MAR-2024, entry version 49.
DE SubName: Full=HTH-type transcriptional regulator treR {ECO:0000313|EMBL:CCO58776.1};
GN Name=treR {ECO:0000313|EMBL:CCO58776.1};
GN ORFNames=VIBNI_A2729 {ECO:0000313|EMBL:CCO58776.1};
OS Vibrio nigripulchritudo.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=28173 {ECO:0000313|EMBL:CCO58776.1, ECO:0000313|Proteomes:UP000016895};
RN [1] {ECO:0000313|EMBL:CCO58776.1, ECO:0000313|Proteomes:UP000016895}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SnF1 {ECO:0000313|Proteomes:UP000016895};
RX PubMed=23739050; DOI=10.1038/ismej.2013.90;
RA Goudenege D., Labreuche Y., Krin E., Ansquer D., Mangenot S., Calteau A.,
RA Medigue C., Mazel D., Polz M.F., Le Roux F.;
RT "Comparative genomics of pathogenic lineages of Vibrio nigripulchritudo
RT identifies virulence-associated traits.";
RL ISME J. 7:1985-1996(2013).
CC ---------------------------------------------------------------------------
CC Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC ---------------------------------------------------------------------------
DR EMBL; FO203526; CCO58776.1; -; Genomic_DNA.
DR RefSeq; WP_022551426.1; NC_022528.1.
DR AlphaFoldDB; U4K868; -.
DR STRING; 28173.VIBNI_A2729; -.
DR KEGG; vni:VIBNI_A2729; -.
DR PATRIC; fig|1260221.3.peg.2598; -.
DR eggNOG; COG1609; Bacteria.
DR OrthoDB; 198888at2; -.
DR Proteomes; UP000016895; Chromosome 1.
DR GO; GO:0003677; F:DNA binding; IEA:UniProtKB-KW.
DR GO; GO:0045892; P:negative regulation of DNA-templated transcription; IEA:InterPro.
DR GO; GO:0005991; P:trehalose metabolic process; IEA:InterPro.
DR CDD; cd01392; HTH_LacI; 1.
DR CDD; cd01542; PBP1_TreR-like; 1.
DR Gene3D; 3.40.50.2300; -; 2.
DR Gene3D; 1.10.260.40; lambda repressor-like DNA-binding domains; 1.
DR InterPro; IPR000843; HTH_LacI.
DR InterPro; IPR046335; LacI/GalR-like_sensor.
DR InterPro; IPR010982; Lambda_DNA-bd_dom_sf.
DR InterPro; IPR028082; Peripla_BP_I.
DR InterPro; IPR012771; Trehalos_R_gpbac.
DR NCBIfam; TIGR02405; trehalos_R_Ecol; 1.
DR PANTHER; PTHR30146:SF153; HTH-TYPE TRANSCRIPTIONAL REGULATOR TRER; 1.
DR PANTHER; PTHR30146; LACI-RELATED TRANSCRIPTIONAL REPRESSOR; 1.
DR Pfam; PF00356; LacI; 1.
DR Pfam; PF13377; Peripla_BP_3; 1.
DR SMART; SM00354; HTH_LACI; 1.
DR SUPFAM; SSF47413; lambda repressor-like DNA-binding domains; 1.
DR SUPFAM; SSF53822; Periplasmic binding protein-like I; 1.
DR PROSITE; PS00356; HTH_LACI_1; 1.
DR PROSITE; PS50932; HTH_LACI_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000016895};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 5..59
FT /note="HTH lacI-type"
FT /evidence="ECO:0000259|PROSITE:PS50932"
SQ SEQUENCE 316 AA; 34246 MW; BD7E1006104EBAEF CRC64;
MSKKLTILDI ARLAGVGKST VSRVLTKDPK VKPDTRKKVE QIIADSGYVP SKSAQSMRGG
SQKVIGVIIS RLDSPSENLV VSALLKALYA EGYDVVIMES QFDCDKTNEH LSVLKRRNVD
GVIVFGFSGC DMYALENWGH RAVVIAADST EISSVNYDNQ AVIEMALNQL RESNKSNIAF
IGVDDSDVTT GLMRTQAYLS WCESHAIKPN YRSGELNHES GYRLVDDVLK PETDAIVCAS
DSIALGVNKR LQELGRGDVT VFGVGGNPLL SFLFPNTLSI DPGYVEAGNQ AASLLIDQLQ
NEPDVNHITL SPSLPG
//
