ID U4K8C1_9VIBR Unreviewed; 272 AA.
AC U4K8C1;
DT 11-DEC-2013, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 1.
DT 27-MAR-2024, entry version 54.
DE SubName: Full=Putative Transcriptional regulator, AraC-family {ECO:0000313|EMBL:CCO61607.1};
GN ORFNames=VIBNI_B1887 {ECO:0000313|EMBL:CCO61607.1};
OS Vibrio nigripulchritudo.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Vibrionales; Vibrionaceae;
OC Vibrio.
OX NCBI_TaxID=28173 {ECO:0000313|EMBL:CCO61607.1, ECO:0000313|Proteomes:UP000016895};
RN [1] {ECO:0000313|EMBL:CCO61607.1, ECO:0000313|Proteomes:UP000016895}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=SnF1 {ECO:0000313|Proteomes:UP000016895};
RX PubMed=23739050; DOI=10.1038/ismej.2013.90;
RA Goudenege D., Labreuche Y., Krin E., Ansquer D., Mangenot S., Calteau A.,
RA Medigue C., Mazel D., Polz M.F., Le Roux F.;
RT "Comparative genomics of pathogenic lineages of Vibrio nigripulchritudo
RT identifies virulence-associated traits.";
RL ISME J. 7:1985-1996(2013).
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DR EMBL; FO203527; CCO61607.1; -; Genomic_DNA.
DR RefSeq; WP_022562010.1; NC_022543.1.
DR AlphaFoldDB; U4K8C1; -.
DR STRING; 28173.VIBNI_B1887; -.
DR KEGG; vni:VIBNI_B1887; -.
DR PATRIC; fig|1260221.3.peg.5462; -.
DR eggNOG; COG2207; Bacteria.
DR OrthoDB; 9809338at2; -.
DR Proteomes; UP000016895; Chromosome 2.
DR GO; GO:0003700; F:DNA-binding transcription factor activity; IEA:InterPro.
DR GO; GO:0043565; F:sequence-specific DNA binding; IEA:InterPro.
DR Gene3D; 1.10.10.60; Homeodomain-like; 1.
DR InterPro; IPR003313; AraC-bd.
DR InterPro; IPR009057; Homeobox-like_sf.
DR InterPro; IPR037923; HTH-like.
DR InterPro; IPR018060; HTH_AraC.
DR InterPro; IPR018062; HTH_AraC-typ_CS.
DR PANTHER; PTHR46796:SF2; HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAS; 1.
DR PANTHER; PTHR46796; HTH-TYPE TRANSCRIPTIONAL ACTIVATOR RHAS-RELATED; 1.
DR Pfam; PF02311; AraC_binding; 1.
DR Pfam; PF12833; HTH_18; 1.
DR SMART; SM00342; HTH_ARAC; 1.
DR SUPFAM; SSF46689; Homeodomain-like; 2.
DR SUPFAM; SSF51215; Regulatory protein AraC; 1.
DR PROSITE; PS00041; HTH_ARAC_FAMILY_1; 1.
DR PROSITE; PS01124; HTH_ARAC_FAMILY_2; 1.
PE 4: Predicted;
KW DNA-binding {ECO:0000256|ARBA:ARBA00023125};
KW Reference proteome {ECO:0000313|Proteomes:UP000016895};
KW Transcription {ECO:0000256|ARBA:ARBA00023163};
KW Transcription regulation {ECO:0000256|ARBA:ARBA00023015}.
FT DOMAIN 172..269
FT /note="HTH araC/xylS-type"
FT /evidence="ECO:0000259|PROSITE:PS01124"
SQ SEQUENCE 272 AA; 31528 MW; 1DC1B08F5BD51BE6 CRC64;
MKQDDSVFLA QSRSLPFVEM RTACDSFACY QAHSHDEFSF GVIDGGSASY RNLKKVHNVH
RGHTVTINPG DMHSCNPDKA QWSYRMLFVD THWIGQLQQE WTGKHGHDYL PFIRNYEQRP
NLYAQFHQLY QALLVEDNPL TTESLMIEYL AMVFGQPQLE GKSIQKPEPN LNRVLEMMGD
QLDKNIALDD FAQEANMSRY QLIRAFNRHF GLSPHAYQLD QRIIKAKSLL KNGLSLAETA
TETGFSDQAH FQRHFKKRLA ITPKHYQSFF VE
//
