ID U4LJR1_PYROM Unreviewed; 600 AA.
AC U4LJR1;
DT 11-DEC-2013, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 1.
DT 27-MAR-2024, entry version 48.
DE SubName: Full=Similar to Uncharacterized RNA-binding protein C17H9.04c acc. no. O13801 {ECO:0000313|EMBL:CCX12872.1};
GN ORFNames=PCON_12466 {ECO:0000313|EMBL:CCX12872.1};
OS Pyronema omphalodes (strain CBS 100304) (Pyronema confluens).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Pezizomycetes;
OC Pezizales; Pyronemataceae; Pyronema.
OX NCBI_TaxID=1076935 {ECO:0000313|EMBL:CCX12872.1};
RN [1] {ECO:0000313|EMBL:CCX12872.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CBS100304 {ECO:0000313|EMBL:CCX12872.1};
RC TISSUE=Vegetative mycelium {ECO:0000313|EMBL:CCX12872.1};
RX PubMed=24068976; DOI=10.1371/journal.pgen.1003820;
RA Traeger S., Altegoer F., Freitag M., Gabaldon T., Kempken F., Kumar A.,
RA Marcet-Houben M., Poggeler S., Stajich J.E., Nowrousian M.;
RT "The genome and development-dependent transcriptomes of Pyronema confluens:
RT a window into fungal evolution.";
RL PLoS Genet. 9:E1003820-E1003820(2013).
CC -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123}.
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DR EMBL; HF935726; CCX12872.1; -; Genomic_DNA.
DR AlphaFoldDB; U4LJR1; -.
DR STRING; 1076935.U4LJR1; -.
DR eggNOG; KOG4198; Eukaryota.
DR OMA; NLDRYVV; -.
DR OrthoDB; 228305at2759; -.
DR Proteomes; UP000018144; Unassembled WGS sequence.
DR GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR GO; GO:0000175; F:3'-5'-RNA exonuclease activity; IEA:InterPro.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd06133; ERI-1_3'hExo_like; 1.
DR CDD; cd12452; RRM_ARP_like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 3.30.420.10; Ribonuclease H-like superfamily/Ribonuclease H; 1.
DR Gene3D; 4.10.1060.10; Zinc finger, RanBP2-type; 2.
DR InterPro; IPR047201; ERI-1_3'hExo-like.
DR InterPro; IPR034351; Nrp1_RRM.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR012337; RNaseH-like_sf.
DR InterPro; IPR036397; RNaseH_sf.
DR InterPro; IPR000504; RRM_dom.
DR InterPro; IPR001876; Znf_RanBP2.
DR InterPro; IPR036443; Znf_RanBP2_sf.
DR PANTHER; PTHR23111:SF40; RNA-BINDING PROTEIN INVOLVED IN HETEROCHROMATIN ASSEMBLY-RELATED; 1.
DR PANTHER; PTHR23111; ZINC FINGER PROTEIN; 1.
DR Pfam; PF00076; RRM_1; 1.
DR Pfam; PF00641; zf-RanBP; 2.
DR SMART; SM00360; RRM; 1.
DR SMART; SM00547; ZnF_RBZ; 2.
DR SUPFAM; SSF90209; Ran binding protein zinc finger-like; 2.
DR SUPFAM; SSF53098; Ribonuclease H-like; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS50102; RRM; 1.
DR PROSITE; PS01358; ZF_RANBP2_1; 2.
DR PROSITE; PS50199; ZF_RANBP2_2; 2.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Nucleus {ECO:0000256|ARBA:ARBA00023242};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00322};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00322}.
FT DOMAIN 246..324
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 345..374
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS50199"
FT DOMAIN 422..453
FT /note="RanBP2-type"
FT /evidence="ECO:0000259|PROSITE:PS50199"
FT REGION 579..600
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 600 AA; 64187 MW; 95DBA76CEC9BD902 CRC64;
MDRYVVIHVA TTCDEHGVYV TKDSAEVIEV GWILLNAKTL EEMHRESVLV RPINTPITPL
CTYVASLTTL TWEHVRQAGS FRDAINRFDS FAQEMLISQS LDFTFVTLDA WDLRVQLPRE
ARDKAVVLPP YLQHSRTFDL RTEYTRWQTH HPESLPFGPS SLANICAALE VEPIQSSAPI
KHNLPFHLQA LAPASPRRAL DEAITLARVL RGLIKKSQPP EQHPDVLARP MDARADVRAF
LSERSKVLHM AGLPHDTTQS ELESWFTQYG GRPIAFWTLR TPDQHKPTGT GFAVFSSHEE
AAESLCMNGR ALNEKAIEVS PSSSRVLDRA AEILTPFPPS KNRPRPGDWT CPSCGFSNFQ
RRTACFRCSF PAVPAAPQDT MYGYSQFSPA NMAAPQPPSM GHGGGHMPSR SMPNSGGMVP
FRAGDWKCGS DNCGYHNFAK NVSCLRCGAS RAGAAVVADT AFPSPVDSQS AYGGVSLGGP
GHGMGGPGPI GGQFGGSGFP GQHFGGQSNN FGLPSGLGGG PSGGFAPLNT SLGQSVGPNT
GGPFDHRAEQ AFSSGPNGGG LYGSGGLSDD AFNFLSSGIG SLGIDDRRKD LNGGGKSPAS
//