ID U4LVJ0_PYROM Unreviewed; 608 AA.
AC U4LVJ0;
DT 11-DEC-2013, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 1.
DT 27-MAR-2024, entry version 46.
DE SubName: Full=Similar to RNA-binding post-transcriptional regulator cip2 acc. no. Q09868 {ECO:0000313|EMBL:CCX32586.1};
GN ORFNames=PCON_13426 {ECO:0000313|EMBL:CCX32586.1};
OS Pyronema omphalodes (strain CBS 100304) (Pyronema confluens).
OC Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Pezizomycetes;
OC Pezizales; Pyronemataceae; Pyronema.
OX NCBI_TaxID=1076935 {ECO:0000313|EMBL:CCX32586.1};
RN [1] {ECO:0000313|EMBL:CCX32586.1}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=CBS100304 {ECO:0000313|EMBL:CCX32586.1};
RC TISSUE=Vegetative mycelium {ECO:0000313|EMBL:CCX32586.1};
RX PubMed=24068976; DOI=10.1371/journal.pgen.1003820;
RA Traeger S., Altegoer F., Freitag M., Gabaldon T., Kempken F., Kumar A.,
RA Marcet-Houben M., Poggeler S., Stajich J.E., Nowrousian M.;
RT "The genome and development-dependent transcriptomes of Pyronema confluens:
RT a window into fungal evolution.";
RL PLoS Genet. 9:E1003820-E1003820(2013).
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DR EMBL; HF935890; CCX32586.1; -; Genomic_DNA.
DR AlphaFoldDB; U4LVJ0; -.
DR STRING; 1076935.U4LVJ0; -.
DR eggNOG; KOG0108; Eukaryota.
DR OMA; AWNANAF; -.
DR OrthoDB; 1363189at2759; -.
DR Proteomes; UP000018144; Unassembled WGS sequence.
DR GO; GO:0003723; F:RNA binding; IEA:UniProtKB-UniRule.
DR CDD; cd02639; R3H_RRM; 1.
DR CDD; cd12253; RRM_PIN4_like; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR Gene3D; 3.30.1370.50; R3H-like domain; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR034186; PIN4-like_RRM.
DR InterPro; IPR034069; R3H_Cip2.
DR InterPro; IPR001374; R3H_dom.
DR InterPro; IPR036867; R3H_dom_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR23003; RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN; 1.
DR PANTHER; PTHR23003:SF17; RNA-BINDING PROTEIN PIN4; 1.
DR Pfam; PF01424; R3H; 1.
DR Pfam; PF00076; RRM_1; 1.
DR SMART; SM00393; R3H; 1.
DR SMART; SM00360; RRM; 1.
DR SUPFAM; SSF82708; R3H domain; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
DR PROSITE; PS51061; R3H; 1.
DR PROSITE; PS50102; RRM; 1.
PE 4: Predicted;
KW RNA-binding {ECO:0000256|ARBA:ARBA00022884, ECO:0000256|PROSITE-
KW ProRule:PRU00176}.
FT DOMAIN 152..230
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 282..346
FT /note="R3H"
FT /evidence="ECO:0000259|PROSITE:PS51061"
FT REGION 29..89
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 239..281
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 503..548
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 560..608
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 39..73
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 239..254
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 264..281
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 515..530
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 608 AA; 65568 MW; A3ACAC6BD48A4AFF CRC64;
MSSHTNYGGQ SFGSNGYFYT GQQAPHFATV GPGAASNPNH GIPTGSPYYD EAETQSHTQW
QQPSGSRTWA SPSGAAALSV MGGGPSPVSA RLMKQAKRSP LPTNWTNNNQ LSQTLPTVNP
MSGMGNGMTL SASPMRAETI GSDMGDEELI PTAIVIKNIP FAVKKEQLVG LMTEISLPLP
YAFNYHFDNG VFRGLAFANF TTAEETAAVI DRLNGFELQG RKLRVEYKKM LPIQERERIE
REKRERRGQL EEQHRPVQHV PPLATSPTPG STRSKPDVDL NDPQTLQFYS QLLLFRDDHT
REALIFPPTL SPQQRRIVHT LAHHMGLAHI SRGNGDNRQV HVFRAANGGN PANISPPAIP
TVHPVESQQR RALTRATTMD FTDTRSEGTA IYSSLGRQAS ALLDIPSSPS SREHILHSRQ
NLRPAKSFAD LRSYTPSPVP SSASFPAALG NNISRYQQGD YGAQSVSTTT PCLTPTATGS
TSHNESLLVN GLAGVSLSST LGGGMGGSLR GDPRDPRGVL SHERERGGET SSGPGHSGMP
GGGVTRSFSM GFDEVRAERN HVMPQRQPRG PDSERGAGFA GRQRQHHNGR TGSGGELDVQ
SGVEIVVE
//
