ID U5DE07_AMBTC Unreviewed; 492 AA.
AC U5DE07;
DT 11-DEC-2013, integrated into UniProtKB/TrEMBL.
DT 11-DEC-2013, sequence version 1.
DT 27-MAR-2024, entry version 41.
DE RecName: Full=RRM domain-containing protein {ECO:0000259|PROSITE:PS50102};
GN ORFNames=AMTR_s00062p00161920 {ECO:0000313|EMBL:ERN19652.1};
OS Amborella trichopoda.
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; Amborellales; Amborellaceae; Amborella.
OX NCBI_TaxID=13333 {ECO:0000313|EMBL:ERN19652.1, ECO:0000313|Proteomes:UP000017836};
RN [1] {ECO:0000313|Proteomes:UP000017836}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24357323;
RG Amborella Genome Project;
RT "The Amborella genome and the evolution of flowering plants.";
RL Science 342:1241089-1241089(2013).
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DR EMBL; KI392068; ERN19652.1; -; Genomic_DNA.
DR AlphaFoldDB; U5DE07; -.
DR STRING; 13333.U5DE07; -.
DR EnsemblPlants; ERN19652; ERN19652; AMTR_s00062p00161920.
DR Gramene; ERN19652; ERN19652; AMTR_s00062p00161920.
DR eggNOG; KOG0118; Eukaryota.
DR HOGENOM; CLU_016304_2_1_1; -.
DR OMA; QTQQWMT; -.
DR Proteomes; UP000017836; Unassembled WGS sequence.
DR GO; GO:0005829; C:cytosol; IBA:GO_Central.
DR GO; GO:0003729; F:mRNA binding; IBA:GO_Central.
DR CDD; cd12344; RRM1_SECp43_like; 1.
DR CDD; cd12345; RRM2_SECp43_like; 1.
DR Gene3D; 3.30.70.330; -; 3.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR000504; RRM_dom.
DR PANTHER; PTHR47640:SF48; POLYADENYLATE-BINDING PROTEIN RBP45B; 1.
DR PANTHER; PTHR47640; TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED; 1.
DR Pfam; PF00076; RRM_1; 3.
DR SMART; SM00360; RRM; 3.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 2.
DR PROSITE; PS50102; RRM; 3.
PE 4: Predicted;
KW Reference proteome {ECO:0000313|Proteomes:UP000017836};
KW RNA-binding {ECO:0000256|PROSITE-ProRule:PRU00176}.
FT DOMAIN 92..172
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 184..263
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT DOMAIN 356..428
FT /note="RRM"
FT /evidence="ECO:0000259|PROSITE:PS50102"
FT REGION 1..76
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 425..445
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 10..49
FT /note="Pro residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 50..76
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 492 AA; 55106 MW; DF464740BCFE06F1 CRC64;
MMQQPGQGVV PPSMAPPPMD PQQQQPPPQQ QPWMMMPPQP HPQQPLPQPV NPQASHMWNQ
QPQPQPQVQP QAQAQPMQVQ YSMQPASADE VRTLWIGDLQ YWMDEAYIHS CFAHTGEVLS
VKIIRNKQTG QPEGYGFIEF ASRATAERII QTVNGTTMPN TEQSFRLNWA TFGGGDKRSE
GTDFPVFVGD LASDVTDYLL QETFRSHYSS VKGAKVVTDR LTGRSKGYGF VRFGDENEQL
RAMTEMNGVF CSTRPMRIGP ATTKKTVGVQ QQYPAKGHWV LFDFASVLIF WSFCFHSYTF
EEKPPYVASD AKRLCPLRGL EQISAETNVS FSAWHRLAPY QSNPQASQSE SDPNNTTIFV
GGLDPNVNDD ILKQVFGQYG ELIHVKIPVG KRCGFVQFAN RACAEEALLM LNGTQLGQQS
IRLSWGRSPS NKQDSSGSWP QPQADPNQWN GGAYYGYNQG YETYGYAPPP QDPAMYAYGG
YPGYGNYQQQ QI
//
