GenomeNet

Database: UniProt
Entry: U5FYB3_POPTR
LinkDB: U5FYB3_POPTR
Original site: U5FYB3_POPTR 
ID   U5FYB3_POPTR            Unreviewed;       726 AA.
AC   U5FYB3;
DT   11-DEC-2013, integrated into UniProtKB/TrEMBL.
DT   11-DEC-2013, sequence version 1.
DT   07-JUN-2017, entry version 32.
DE   SubName: Full=Calcium channel 1 family protein {ECO:0000313|EMBL:ERP54287.1};
GN   ORFNames=POPTR_0013s13470g {ECO:0000313|EMBL:ERP54287.1};
OS   Populus trichocarpa (Western balsam poplar) (Populus balsamifera
OS   subsp. trichocarpa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliophyta; eudicotyledons; Gunneridae;
OC   Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae;
OC   Populus.
OX   NCBI_TaxID=3694 {ECO:0000313|EMBL:ERP54287.1, ECO:0000313|Proteomes:UP000006729};
RN   [1] {ECO:0000313|EMBL:ERP54287.1, ECO:0000313|Proteomes:UP000006729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX   PubMed=16973872; DOI=10.1126/science.1128691;
RA   Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA   Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA   Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D.,
RA   Boerjan W., Brun A., Brunner A., Busov V., Campbell M., Carlson J.,
RA   Chalot M., Chapman J., Chen G.-L., Cooper D., Coutinho P.M.,
RA   Couturier J., Covert S., Cronk Q., Cunningham R., Davis J.,
RA   Degroeve S., Dejardin A., dePamphilis C.W., Detter J., Dirks B.,
RA   Dubchak I., Duplessis S., Ehlting J., Ellis B., Gendler K.,
RA   Goodstein D., Gribskov M., Grimwood J., Groover A., Gunter L.,
RA   Hamberger B., Heinze B., Helariutta Y., Henrissat B., Holligan D.,
RA   Holt R., Huang W., Islam-Faridi N., Jones S., Jones-Rhoades M.,
RA   Jorgensen R., Joshi C., Kangasjaervi J., Karlsson J., Kelleher C.,
RA   Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA   Leebens-Mack J., Leple J.-C., Locascio P., Lou Y., Lucas S.,
RA   Martin F., Montanini B., Napoli C., Nelson D.R., Nelson C.,
RA   Nieminen K., Nilsson O., Pereda V., Peter G., Philippe R., Pilate G.,
RA   Poliakov A., Razumovskaya J., Richardson P., Rinaldi C., Ritland K.,
RA   Rouze P., Ryaboy D., Schmutz J., Schrader J., Segerman B., Shin H.,
RA   Siddiqui A., Sterky F., Terry A., Tsai C.-J., Uberbacher E.,
RA   Unneberg P., Vahala J., Wall K., Wessler S., Yang G., Yin T.,
RA   Douglas C., Marra M., Sandberg G., Van de Peer Y., Rokhsar D.S.;
RT   "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL   Science 313:1596-1604(2006).
CC   -!- CAUTION: Lacks conserved residue(s) required for the propagation
CC       of feature annotation. {ECO:0000256|PROSITE-ProRule:PRU00448}.
CC   -----------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see http://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution-NoDerivs License
CC   -----------------------------------------------------------------------
DR   EMBL; CM000349; ERP54287.1; -; Genomic_DNA.
DR   RefSeq; XP_006376490.1; XM_006376428.1.
DR   STRING; 3694.POPTR_0013s13470.1; -.
DR   EnsemblPlants; POPTR_0013s13470.1; POPTR_0013s13470.1; POPTR_0013s13470.
DR   GeneID; 18104631; -.
DR   Gramene; POPTR_0013s13470.1; POPTR_0013s13470.1; POPTR_0013s13470.
DR   KEGG; pop:POPTR_0013s13470g; -.
DR   eggNOG; ENOG410INF7; Eukaryota.
DR   eggNOG; ENOG410XZT8; LUCA.
DR   KO; K16900; -.
DR   OMA; WLGFHTF; -.
DR   OrthoDB; EOG093603ZA; -.
DR   Proteomes; UP000006729; Linkage group LGXIII.
DR   GO; GO:0016021; C:integral component of membrane; IEA:UniProtKB-KW.
DR   GO; GO:0005886; C:plasma membrane; IBA:GO_Central.
DR   GO; GO:0005509; F:calcium ion binding; IEA:InterPro.
DR   GO; GO:0005261; F:cation channel activity; IBA:GO_Central.
DR   GO; GO:0005245; F:voltage-gated calcium channel activity; IEA:InterPro.
DR   GO; GO:0034220; P:ion transmembrane transport; IBA:GO_Central.
DR   GO; GO:0086010; P:membrane depolarization during action potential; IBA:GO_Central.
DR   CDD; cd00051; EFh; 1.
DR   InterPro; IPR011992; EF-hand-dom_pair.
DR   InterPro; IPR002048; EF_hand_dom.
DR   InterPro; IPR005821; Ion_trans_dom.
DR   InterPro; IPR028801; TPC1.
DR   PANTHER; PTHR10037:SF232; PTHR10037:SF232; 1.
DR   Pfam; PF13499; EF-hand_7; 1.
DR   Pfam; PF00520; Ion_trans; 2.
DR   SMART; SM00054; EFh; 2.
DR   SUPFAM; SSF47473; SSF47473; 1.
DR   PROSITE; PS50222; EF_HAND_2; 2.
PE   4: Predicted;
KW   Complete proteome {ECO:0000313|Proteomes:UP000006729};
KW   Membrane {ECO:0000256|SAM:Phobius};
KW   Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW   Transmembrane {ECO:0000256|SAM:Phobius};
KW   Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM     72     96       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    123    146       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    166    192       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    212    231       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    276    298       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    425    442       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    462    480       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    492    510       Helical. {ECO:0000256|SAM:Phobius}.
FT   TRANSMEM    642    665       Helical. {ECO:0000256|SAM:Phobius}.
FT   DOMAIN      315    350       EF-hand. {ECO:0000259|PROSITE:PS50222}.
FT   DOMAIN      356    391       EF-hand. {ECO:0000259|PROSITE:PS50222}.
SQ   SEQUENCE   726 AA;  84239 MW;  396436EAC487DE67 CRC64;
     MEKPLLGESS GGRDIRFRRR DQSTPKFPRR SDAITHGSPF QKAAALVDLA EDGIGIPEEI
     LDQANFESVA KFYFIFIQFD IIWTLNYFAM IVLNFLEKPL WCQNNSGHSC NDREYFYLGE
     LPYLTAAESF VFEGITLIIL AAHIFFPISY EGFRIYWKNP LNCSKVLGYV AFNFLPFRIA
     PYIRVVLFIL YIRDLQRSII ILGGMLKTYV NVLALGFLFL LFSSWLAFVM FEDTQQGKIV
     FTSYGITLYQ MFVLFTTSNN PDVWIPAYKV SRWYSLFFIL YVLIGVYFVT NLVLAVVYDS
     FKDQLVKQVS EMDRSRKRIL IKAFNLIDKN DAGYLNKEQC IHLFEALNKY RTLPSISREE
     FELIFDELDD SHDFKINLDE FEDLCNAIAL RFQKEDVPSY FEYLPSIYHS LFSEKLKEFV
     RSPKFGYIIS SILVMNLLAV ITETTLDIAN NSAQKVWQEV EFVFGWIYVV EMALKIYAYG
     FENYWRDGQN RFDFVITLVI VIGETVTFAS PNELTFLSNG EWIRYLLIAR LLRLIRILMY
     VRSYRAFVAT FLTLIPSLMP YLGTIFCVMC IYCSLGIQIF GGLVNAGNLD LEGTGLAEDD
     YLLFNFNDYP NGMVTLFNLL VMGNWHEWMQ SYKDLTGTYW SLAYFISFYL VTVLLLLNLV
     MAFVLEGFFA EMELETAEKC EAEDKEGSNS KSRRRSVGTK TRSQRVDNLL HHMLSAELEK
     PECSNA
//
DBGET integrated database retrieval system