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Database: UniProt
Entry: U5G6C4_POPTR
LinkDB: U5G6C4_POPTR
Original site: U5G6C4_POPTR 
ID   U5G6C4_POPTR            Unreviewed;       184 AA.
AC   U5G6C4;
DT   11-DEC-2013, integrated into UniProtKB/TrEMBL.
DT   11-DEC-2013, sequence version 1.
DT   24-JAN-2024, entry version 43.
DE   RecName: Full=Pentatricopeptide repeat-containing protein {ECO:0008006|Google:ProtNLM};
GN   ORFNames=POPTR_006G078400 {ECO:0000313|EMBL:PNT30382.1};
OS   Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp.
OS   trichocarpa).
OC   Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC   Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC   rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus.
OX   NCBI_TaxID=3694 {ECO:0000313|EMBL:PNT30382.1, ECO:0000313|Proteomes:UP000006729};
RN   [1] {ECO:0000313|EMBL:PNT30382.1, ECO:0000313|Proteomes:UP000006729}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cv. Nisqually {ECO:0000313|Proteomes:UP000006729};
RX   PubMed=16973872; DOI=10.1126/science.1128691;
RA   Tuskan G.A., Difazio S., Jansson S., Bohlmann J., Grigoriev I.,
RA   Hellsten U., Putnam N., Ralph S., Rombauts S., Salamov A., Schein J.,
RA   Sterck L., Aerts A., Bhalerao R.R., Bhalerao R.P., Blaudez D., Boerjan W.,
RA   Brun A., Brunner A., Busov V., Campbell M., Carlson J., Chalot M.,
RA   Chapman J., Chen G.L., Cooper D., Coutinho P.M., Couturier J., Covert S.,
RA   Cronk Q., Cunningham R., Davis J., Degroeve S., Dejardin A.,
RA   Depamphilis C., Detter J., Dirks B., Dubchak I., Duplessis S., Ehlting J.,
RA   Ellis B., Gendler K., Goodstein D., Gribskov M., Grimwood J., Groover A.,
RA   Gunter L., Hamberger B., Heinze B., Helariutta Y., Henrissat B.,
RA   Holligan D., Holt R., Huang W., Islam-Faridi N., Jones S.,
RA   Jones-Rhoades M., Jorgensen R., Joshi C., Kangasjarvi J., Karlsson J.,
RA   Kelleher C., Kirkpatrick R., Kirst M., Kohler A., Kalluri U., Larimer F.,
RA   Leebens-Mack J., Leple J.C., Locascio P., Lou Y., Lucas S., Martin F.,
RA   Montanini B., Napoli C., Nelson D.R., Nelson C., Nieminen K., Nilsson O.,
RA   Pereda V., Peter G., Philippe R., Pilate G., Poliakov A., Razumovskaya J.,
RA   Richardson P., Rinaldi C., Ritland K., Rouze P., Ryaboy D., Schmutz J.,
RA   Schrader J., Segerman B., Shin H., Siddiqui A., Sterky F., Terry A.,
RA   Tsai C.J., Uberbacher E., Unneberg P., Vahala J., Wall K., Wessler S.,
RA   Yang G., Yin T., Douglas C., Marra M., Sandberg G., Van de Peer Y.,
RA   Rokhsar D.;
RT   "The genome of black cottonwood, Populus trichocarpa (Torr. & Gray).";
RL   Science 313:1596-1604(2006).
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DR   EMBL; CM009295; PNT30382.1; -; Genomic_DNA.
DR   RefSeq; XP_006381168.1; XM_006381106.1.
DR   AlphaFoldDB; U5G6C4; -.
DR   STRING; 3694.U5G6C4; -.
DR   eggNOG; KOG4197; Eukaryota.
DR   HOGENOM; CLU_1470564_0_0_1; -.
DR   InParanoid; U5G6C4; -.
DR   Proteomes; UP000006729; Chromosome 6.
DR   Gene3D; 1.25.40.10; Tetratricopeptide repeat domain; 1.
DR   InterPro; IPR002885; Pentatricopeptide_rpt.
DR   InterPro; IPR011990; TPR-like_helical_dom_sf.
DR   NCBIfam; TIGR00756; PPR; 1.
DR   PANTHER; PTHR47493; OS08G0520200 PROTEIN; 1.
DR   PANTHER; PTHR47493:SF1; OS08G0520200 PROTEIN; 1.
DR   Pfam; PF01535; PPR; 2.
DR   PROSITE; PS51375; PPR; 1.
PE   4: Predicted;
KW   Reference proteome {ECO:0000313|Proteomes:UP000006729};
KW   Repeat {ECO:0000256|ARBA:ARBA00022737}.
FT   REPEAT          45..79
FT                   /note="PPR"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00708"
SQ   SEQUENCE   184 AA;  20886 MW;  620AFA3D77E60FED CRC64;
     MIRQWECDKG VCGKETCVDC ASLIQTFCKQ RRAHLELKCE EFLPDNTTLS AMMRCYAYSG
     LLPQSQAIWE EMLYSSSVPS VQVVSELIDN YARSEIFDEV IKILDQLSSS RTFDFFHQVY
     SLAISCFGKG GQLDLMEDTL KKMVSKGLRM SLLWDLHLGL EHMKHDKVAP YLVTYGCDID
     ASGA
//
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