ID U5Q9B1_9PSED Unreviewed; 178 AA.
AC U5Q9B1;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 03-MAY-2023, entry version 22.
DE SubName: Full=DNA-directed RNA polymerase subunit D {ECO:0000313|EMBL:AGY55470.1};
DE Flags: Fragment;
GN Name=rpoD {ECO:0000313|EMBL:AGY55470.1};
OS Pseudomonas sp. PN703.1.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas.
OX NCBI_TaxID=1411182 {ECO:0000313|EMBL:AGY55470.1};
RN [1] {ECO:0000313|EMBL:AGY55470.1}
RP NUCLEOTIDE SEQUENCE.
RC STRAIN=PN703.1 {ECO:0000313|EMBL:AGY55470.1};
RX PubMed=24116076;
RA Alvarez-Perez S., de Vega C., Herrera C.M.;
RT "Multilocus sequence analysis of nectar pseudomonads reveals high genetic
RT diversity and contrasting recombination patterns.";
RL PLoS ONE 8:E75797-E75797(2013).
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DR EMBL; KC822857; AGY55470.1; -; Genomic_DNA.
DR AlphaFoldDB; U5Q9B1; -.
DR GO; GO:0000428; C:DNA-directed RNA polymerase complex; IEA:UniProtKB-KW.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR InterPro; IPR007631; RNA_pol_sigma_70_non-ess.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR Pfam; PF04546; Sigma70_ner; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
PE 4: Predicted;
KW DNA-directed RNA polymerase {ECO:0000313|EMBL:AGY55470.1};
KW Transcription {ECO:0000313|EMBL:AGY55470.1}.
FT DOMAIN 3..178
FT /note="RNA polymerase sigma factor 70 non-essential"
FT /evidence="ECO:0000259|Pfam:PF04546"
FT REGION 1..67
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 42..63
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:AGY55470.1"
FT NON_TER 178
FT /evidence="ECO:0000313|EMBL:AGY55470.1"
SQ SEQUENCE 178 AA; 19795 MW; 9F9C423B93D4DAF7 CRC64;
TTEGGRLSDV LAGYIDPDDG SLPNESEVLP VPNKATDAKA VDDEKDEEEE SDDADEEEGD
GGPDPEEARL RFGAVAEQLE KTKKVLKKHG RDNDHAVEEF VALALLFSPI KLVPKQYEAL
VIRVRESLER VRGLERAIMQ LAVRDARMPR ADFLRHFPGN ETNTEWTSGL LKGKPKYA
//
