GenomeNet

Database: UniProt
Entry: U6DJN6_NEOVI
LinkDB: U6DJN6_NEOVI
Original site: U6DJN6_NEOVI 
ID   U6DJN6_NEOVI            Unreviewed;       567 AA.
AC   U6DJN6;
DT   22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT   22-JAN-2014, sequence version 1.
DT   27-MAR-2024, entry version 29.
DE   SubName: Full=Tigger transposable element-derived protein 1 {ECO:0000313|EMBL:CCP82078.1};
DE   Flags: Fragment;
GN   Name=TIGD1 {ECO:0000313|EMBL:CCP82078.1};
OS   Neovison vison (American mink) (Mustela vison).
OC   Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia;
OC   Eutheria; Laurasiatheria; Carnivora; Caniformia; Musteloidea; Mustelidae;
OC   Mustelinae; Neogale.
OX   NCBI_TaxID=452646 {ECO:0000313|EMBL:CCP82078.1};
RN   [1] {ECO:0000313|EMBL:CCP82078.1}
RP   NUCLEOTIDE SEQUENCE.
RC   TISSUE=Pool of brain {ECO:0000313|EMBL:CCP82078.1};
RA   Anistoroaei R., Christensen K.;
RT   "An American mink transcriptome.";
RL   Submitted (NOV-2012) to the EMBL/GenBank/DDBJ databases.
CC   -!- SUBCELLULAR LOCATION: Nucleus {ECO:0000256|ARBA:ARBA00004123,
CC       ECO:0000256|PROSITE-ProRule:PRU00320}.
CC   ---------------------------------------------------------------------------
CC   Copyrighted by the UniProt Consortium, see https://www.uniprot.org/terms
CC   Distributed under the Creative Commons Attribution (CC BY 4.0) License
CC   ---------------------------------------------------------------------------
DR   EMBL; HAAF01010254; CCP82078.1; -; mRNA.
DR   AlphaFoldDB; U6DJN6; -.
DR   GO; GO:0005634; C:nucleus; IEA:UniProtKB-SubCell.
DR   GO; GO:0003677; F:DNA binding; IEA:UniProtKB-UniRule.
DR   Gene3D; 1.10.10.60; Homeodomain-like; 2.
DR   InterPro; IPR004875; DDE_SF_endonuclease_dom.
DR   InterPro; IPR009057; Homeobox-like_sf.
DR   InterPro; IPR006600; HTH_CenpB_DNA-bd_dom.
DR   InterPro; IPR007889; HTH_Psq.
DR   PANTHER; PTHR19303:SF71; DDE-1 DOMAIN-CONTAINING PROTEIN; 1.
DR   PANTHER; PTHR19303; TRANSPOSON; 1.
DR   Pfam; PF04218; CENP-B_N; 1.
DR   Pfam; PF03184; DDE_1; 1.
DR   Pfam; PF03221; HTH_Tnp_Tc5; 1.
DR   SMART; SM00674; CENPB; 1.
DR   SUPFAM; SSF46689; Homeodomain-like; 2.
DR   PROSITE; PS51253; HTH_CENPB; 1.
DR   PROSITE; PS50960; HTH_PSQ; 1.
PE   2: Evidence at transcript level;
KW   DNA-binding {ECO:0000256|PROSITE-ProRule:PRU00320};
KW   Nucleus {ECO:0000256|PROSITE-ProRule:PRU00320}.
FT   DOMAIN          6..57
FT                   /note="HTH psq-type"
FT                   /evidence="ECO:0000259|PROSITE:PS50960"
FT   DOMAIN          71..149
FT                   /note="HTH CENPB-type"
FT                   /evidence="ECO:0000259|PROSITE:PS51253"
FT   DNA_BIND        33..53
FT                   /note="H-T-H motif"
FT                   /evidence="ECO:0000256|PROSITE-ProRule:PRU00320"
FT   REGION          527..567
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:CCP82078.1"
FT   NON_TER         567
FT                   /evidence="ECO:0000313|EMBL:CCP82078.1"
SQ   SEQUENCE   567 AA;  65751 MW;  C2EDA6D4711D9A58 CRC64;
     LLPGQTGIKR RRRVMPLEDK MKILEKLEEG VSNTDVGRLF GVNESTVRTI KKNEKAIRAS
     MESVSPVCSK VLCIPRDVNI EKMETELTFW VEDQTIGGRP LTLKAICSQA KRIYKQLVET
     TGNGNPDKFH ASKGWFEKFR NRYSLRNSRL MGEEEPLNAQ SAPKYSKQLQ RLIRARGYVP
     QQVFNAEEMS LFWKCMPSRT FREKDKNPES LEEAKDRISL IFCANAAGDK MIKPLLLYKD
     PNPTCLLEKD KNRLPVFWRS HPKVSLTTAL FLDWFHNCFI HQARTYLIEK NLEFRVLLIL
     DRGPNHPDSL FFAHPNVDIV FLPLEGTSYL QPLDQGIIEA FRRYYTKHMF DHFADCIEKN
     PCLTLKETWQ QYSIADALVV IKEAMDDIKP AALNKAWWKL WDDVVNDYAC FPRANEEVAK
     IIESAKRMDF KFFDIEEGEI NELLKFQALA ITERESVSVN TEEDKSPEPE VKMNLRKLNA
     VLRQASDLID AAIDMDPFLD RSLAFKKDLN KLLYTYKEVQ KNLQNKAKEL KEEKDTNKEV
     VWMKTMDTES ESEGESESES ESKSESE
//
DBGET integrated database retrieval system