ID U6E3A1_9PSED Unreviewed; 220 AA.
AC U6E3A1;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 03-MAY-2023, entry version 18.
DE SubName: Full=RNA polymerase sigma factor {ECO:0000313|EMBL:CCV18335.1};
DE Flags: Fragment;
GN Name=rpoD {ECO:0000313|EMBL:CCV18335.1};
OS uncultured Pseudomonas sp.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas; environmental samples.
OX NCBI_TaxID=114707 {ECO:0000313|EMBL:CCV18335.1};
RN [1] {ECO:0000313|EMBL:CCV18335.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=23920133; DOI=10.1099/mic.0.068031-0;
RA Ghyselinck J., Coorevits A., Van Landschoot A., Samyn E., Heylen K.,
RA De Vos P.;
RT "An rpoD gene sequence based evaluation of cultured Pseudomonas diversity
RT on different growth media.";
RL Microbiology 159:2097-2108(2013).
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DR EMBL; HF932015; CCV18322.1; -; Genomic_DNA.
DR EMBL; HF932016; CCV18323.1; -; Genomic_DNA.
DR EMBL; HF932020; CCV18327.1; -; Genomic_DNA.
DR EMBL; HF932024; CCV18331.1; -; Genomic_DNA.
DR EMBL; HF932028; CCV18335.1; -; Genomic_DNA.
DR EMBL; HF932032; CCV18339.1; -; Genomic_DNA.
DR EMBL; HF932034; CCV18341.1; -; Genomic_DNA.
DR EMBL; HF932038; CCV18345.1; -; Genomic_DNA.
DR EMBL; HF932050; CCV18357.1; -; Genomic_DNA.
DR EMBL; HF932068; CCV18375.1; -; Genomic_DNA.
DR EMBL; HF932099; CCV18406.1; -; Genomic_DNA.
DR EMBL; HF932101; CCV18408.1; -; Genomic_DNA.
DR EMBL; HF932117; CCV18424.1; -; Genomic_DNA.
DR EMBL; HF932123; CCV18430.1; -; Genomic_DNA.
DR EMBL; HF932129; CCV18436.1; -; Genomic_DNA.
DR EMBL; HF932142; CCV18449.1; -; Genomic_DNA.
DR EMBL; HF932159; CCV18466.1; -; Genomic_DNA.
DR EMBL; HF932164; CCV18471.1; -; Genomic_DNA.
DR EMBL; HF932168; CCV18475.1; -; Genomic_DNA.
DR EMBL; HF932170; CCV18477.1; -; Genomic_DNA.
DR EMBL; HF932171; CCV18478.1; -; Genomic_DNA.
DR EMBL; HF932174; CCV18481.1; -; Genomic_DNA.
DR EMBL; HF932184; CCV18491.1; -; Genomic_DNA.
DR EMBL; HF932204; CCV18511.1; -; Genomic_DNA.
DR EMBL; HF932235; CCV18542.1; -; Genomic_DNA.
DR EMBL; HF932254; CCV18561.1; -; Genomic_DNA.
DR EMBL; HF932261; CCV18568.1; -; Genomic_DNA.
DR EMBL; HF932311; CCV18618.1; -; Genomic_DNA.
DR EMBL; HF932313; CCV18620.1; -; Genomic_DNA.
DR EMBL; HF932319; CCV18626.1; -; Genomic_DNA.
DR EMBL; HF932330; CCV18637.1; -; Genomic_DNA.
DR EMBL; HF932333; CCV18640.1; -; Genomic_DNA.
DR EMBL; HF932350; CCV18657.1; -; Genomic_DNA.
DR EMBL; HF932378; CCV18685.1; -; Genomic_DNA.
DR EMBL; HF932417; CCV18724.1; -; Genomic_DNA.
DR EMBL; HF932429; CCV18736.1; -; Genomic_DNA.
DR EMBL; HF932437; CCV18744.1; -; Genomic_DNA.
DR EMBL; HF932439; CCV18746.1; -; Genomic_DNA.
DR EMBL; HF932440; CCV18747.1; -; Genomic_DNA.
DR EMBL; HF932442; CCV18749.1; -; Genomic_DNA.
DR EMBL; HF932444; CCV18751.1; -; Genomic_DNA.
DR EMBL; HF932445; CCV18752.1; -; Genomic_DNA.
DR EMBL; HF932446; CCV18753.1; -; Genomic_DNA.
DR EMBL; HF932455; CCV18762.1; -; Genomic_DNA.
DR EMBL; HF932456; CCV18763.1; -; Genomic_DNA.
DR EMBL; HF932458; CCV18765.1; -; Genomic_DNA.
DR EMBL; HF932460; CCV18767.1; -; Genomic_DNA.
DR EMBL; HF932470; CCV18777.1; -; Genomic_DNA.
DR EMBL; HF932480; CCV18787.1; -; Genomic_DNA.
DR EMBL; HF932484; CCV18791.1; -; Genomic_DNA.
DR EMBL; HF932882; CCV19189.1; -; Genomic_DNA.
DR EMBL; HF933112; CCV19419.1; -; Genomic_DNA.
DR AlphaFoldDB; U6E3A1; -.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR InterPro; IPR007631; RNA_pol_sigma_70_non-ess.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR Pfam; PF04546; Sigma70_ner; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
PE 4: Predicted;
FT DOMAIN 15..220
FT /note="RNA polymerase sigma factor 70 non-essential"
FT /evidence="ECO:0000259|Pfam:PF04546"
FT REGION 44..93
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 71..90
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:CCV18335.1"
FT NON_TER 220
FT /evidence="ECO:0000313|EMBL:CCV18335.1"
SQ SEQUENCE 220 AA; 24061 MW; 0E1FC9BA79635978 CRC64;
IEEGIREVMG AIAHFPGTVD HILSEYTRVT TEGGRLSDVL SGYIDPDDGI APPAAEVPPP
VDAKAAKADD DSEDDDAEAS GDDEDEVESG PDPIIAAQRF GAVSDQMEIT RKALKKHGRG
NKQAIAELLA LAELFMPIKL VPKQFEGLVE RVRSALERLR AQERAIMQLC VRDARMPRAD
FLRQFPGNEV DESWTDALAK GKAKYAEAIG RLQPDIIRCQ
//
