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Database: UniProt
Entry: U6E416_9PSED
LinkDB: U6E416_9PSED
Original site: U6E416_9PSED 
ID   U6E416_9PSED            Unreviewed;       203 AA.
AC   U6E416;
DT   22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT   22-JAN-2014, sequence version 1.
DT   03-MAY-2023, entry version 21.
DE   SubName: Full=RNA polymerase sigma factor {ECO:0000313|EMBL:CCV18349.1};
DE   Flags: Fragment;
GN   Name=rpoD {ECO:0000313|EMBL:CCV18349.1};
OS   uncultured Pseudomonas sp.
OC   Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC   Pseudomonadaceae; Pseudomonas; environmental samples.
OX   NCBI_TaxID=114707 {ECO:0000313|EMBL:CCV18349.1};
RN   [1] {ECO:0000313|EMBL:CCV18349.1}
RP   NUCLEOTIDE SEQUENCE.
RX   PubMed=23920133; DOI=10.1099/mic.0.068031-0;
RA   Ghyselinck J., Coorevits A., Van Landschoot A., Samyn E., Heylen K.,
RA   De Vos P.;
RT   "An rpoD gene sequence based evaluation of cultured Pseudomonas diversity
RT   on different growth media.";
RL   Microbiology 159:2097-2108(2013).
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DR   EMBL; HF932042; CCV18349.1; -; Genomic_DNA.
DR   AlphaFoldDB; U6E416; -.
DR   GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR   GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR   GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR   Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR   InterPro; IPR007631; RNA_pol_sigma_70_non-ess.
DR   InterPro; IPR013325; RNA_pol_sigma_r2.
DR   Pfam; PF04546; Sigma70_ner; 1.
DR   SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
PE   4: Predicted;
FT   DOMAIN          3..194
FT                   /note="RNA polymerase sigma factor 70 non-essential"
FT                   /evidence="ECO:0000259|Pfam:PF04546"
FT   REGION          1..61
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        39..57
FT                   /note="Acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   NON_TER         1
FT                   /evidence="ECO:0000313|EMBL:CCV18349.1"
FT   NON_TER         203
FT                   /evidence="ECO:0000313|EMBL:CCV18349.1"
SQ   SEQUENCE   203 AA;  22193 MW;  F2CADDC10C3CF3A5 CRC64;
     GGRLSDVLSG YIDPDDGIAP PAAEVPPPID AKAAKAEESD DDDDAEASDD EEEAESGPDP
     VIAAQRFGAV ADQMEITRKA LKKHGRNNKA AIAELLALAE LFMPIKLVPK QFEALVERVR
     SALDRLRQQE RAIMQLCVRD ARMPRADFLR QFPGNEVDES WSDALAKGKS KYAEAIARVQ
     PDIIRCQQKL TALETETGLT IAE
//
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