ID U6E4C3_9PSED Unreviewed; 199 AA.
AC U6E4C3;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 03-MAY-2023, entry version 18.
DE SubName: Full=RNA polymerase sigma factor {ECO:0000313|EMBL:CCV18760.1};
DE Flags: Fragment;
GN Name=rpoD {ECO:0000313|EMBL:CCV18760.1};
OS uncultured Pseudomonas sp.
OC Bacteria; Pseudomonadota; Gammaproteobacteria; Pseudomonadales;
OC Pseudomonadaceae; Pseudomonas; environmental samples.
OX NCBI_TaxID=114707 {ECO:0000313|EMBL:CCV18760.1};
RN [1] {ECO:0000313|EMBL:CCV18760.1}
RP NUCLEOTIDE SEQUENCE.
RX PubMed=23920133; DOI=10.1099/mic.0.068031-0;
RA Ghyselinck J., Coorevits A., Van Landschoot A., Samyn E., Heylen K.,
RA De Vos P.;
RT "An rpoD gene sequence based evaluation of cultured Pseudomonas diversity
RT on different growth media.";
RL Microbiology 159:2097-2108(2013).
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DR EMBL; HF932453; CCV18760.1; -; Genomic_DNA.
DR AlphaFoldDB; U6E4C3; -.
DR GO; GO:0003677; F:DNA binding; IEA:InterPro.
DR GO; GO:0016987; F:sigma factor activity; IEA:InterPro.
DR GO; GO:0006352; P:DNA-templated transcription initiation; IEA:InterPro.
DR Gene3D; 1.10.601.10; RNA Polymerase Primary Sigma Factor; 1.
DR InterPro; IPR007631; RNA_pol_sigma_70_non-ess.
DR InterPro; IPR013325; RNA_pol_sigma_r2.
DR Pfam; PF04546; Sigma70_ner; 1.
DR SUPFAM; SSF88946; Sigma2 domain of RNA polymerase sigma factors; 1.
PE 4: Predicted;
FT DOMAIN 15..198
FT /note="RNA polymerase sigma factor 70 non-essential"
FT /evidence="ECO:0000259|Pfam:PF04546"
FT REGION 43..92
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 68..90
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:CCV18760.1"
FT NON_TER 199
FT /evidence="ECO:0000313|EMBL:CCV18760.1"
SQ SEQUENCE 199 AA; 21866 MW; 3F8E9AEBC2CC4626 CRC64;
IEEGIREVMG AIAHFPGTVD HILSEYTRVT TEGGRLSDVL SGYIDPDDGI TPPAAEVPPP
VDEKAVKADD DSEDDDAEAS GDDEDEVESG PDPIIAAQRF GAVSDQMEIT RKALKKHGRT
NKQAIAELVA LAELFMPIKL VPKQFEGLVE RVRSALERLR AQERAIMQLC VRDARMPRAD
FLRQFPGNEV DESWTDALA
//