ID V4B216_LOTGI Unreviewed; 411 AA.
AC V4B216;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 27-MAR-2024, entry version 34.
DE RecName: Full=RNA-binding protein 48 {ECO:0000256|ARBA:ARBA00015189};
GN ORFNames=LOTGIDRAFT_238248 {ECO:0000313|EMBL:ESP01556.1};
OS Lottia gigantea (Giant owl limpet).
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda;
OC Patellogastropoda; Lottioidea; Lottiidae; Lottia.
OX NCBI_TaxID=225164 {ECO:0000313|EMBL:ESP01556.1, ECO:0000313|Proteomes:UP000030746};
RN [1] {ECO:0000313|EMBL:ESP01556.1, ECO:0000313|Proteomes:UP000030746}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23254933; DOI=10.1038/nature11696;
RA Simakov O., Marletaz F., Cho S.J., Edsinger-Gonzales E., Havlak P.,
RA Hellsten U., Kuo D.H., Larsson T., Lv J., Arendt D., Savage R.,
RA Osoegawa K., de Jong P., Grimwood J., Chapman J.A., Shapiro H., Aerts A.,
RA Otillar R.P., Terry A.Y., Boore J.L., Grigoriev I.V., Lindberg D.R.,
RA Seaver E.C., Weisblat D.A., Putnam N.H., Rokhsar D.S.;
RT "Insights into bilaterian evolution from three spiralian genomes.";
RL Nature 493:526-531(2013).
CC -!- FUNCTION: As a component of the minor spliceosome, involved in the
CC splicing of U12-type introns in pre-mRNAs.
CC {ECO:0000256|ARBA:ARBA00035004}.
CC -!- SIMILARITY: Belongs to the RBM48 family.
CC {ECO:0000256|ARBA:ARBA00006938}.
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DR EMBL; KB200467; ESP01556.1; -; Genomic_DNA.
DR RefSeq; XP_009047727.1; XM_009049479.1.
DR AlphaFoldDB; V4B216; -.
DR STRING; 225164.V4B216; -.
DR EnsemblMetazoa; LotgiT238248; LotgiP238248; LotgiG238248.
DR GeneID; 20250698; -.
DR KEGG; lgi:LOTGIDRAFT_238248; -.
DR CTD; 20250698; -.
DR HOGENOM; CLU_669553_0_0_1; -.
DR OMA; RRNACIL; -.
DR OrthoDB; 91793at2759; -.
DR Proteomes; UP000030746; Unassembled WGS sequence.
DR GO; GO:0003676; F:nucleic acid binding; IEA:InterPro.
DR CDD; cd12442; RRM_RBM48; 1.
DR Gene3D; 3.30.70.330; -; 1.
DR InterPro; IPR012677; Nucleotide-bd_a/b_plait_sf.
DR InterPro; IPR035979; RBD_domain_sf.
DR InterPro; IPR039599; RBM48.
DR InterPro; IPR034264; RBM48_RRM.
DR PANTHER; PTHR20957:SF0; RNA-BINDING PROTEIN 48; 1.
DR PANTHER; PTHR20957; UNCHARACTERIZED; 1.
DR SUPFAM; SSF54928; RNA-binding domain, RBD; 1.
PE 3: Inferred from homology;
KW Coiled coil {ECO:0000256|SAM:Coils};
KW Reference proteome {ECO:0000313|Proteomes:UP000030746}.
FT COILED 118..173
FT /evidence="ECO:0000256|SAM:Coils"
SQ SEQUENCE 411 AA; 46766 MW; CFB3548C9CD48967 CRC64;
MSAPSSHHIR QNVCANRPAY RDGRQPKAVK VYTVAQESCY LLIQGVQAVG AHTDLNTLCS
GFGVLKSFQA LDDYPSEQFT EVYLVQYERI QSARYAKRKM DDMSFFGGVL HVCYAPEFES
VQETREKLQD RRRQVAAKIR QNEKERGPSK TIVEDLQNQL EKLEQNYPNS SNNVQRSVHN
HKSTLKDGQN TVLRAIATSE VSQHEQRVPP LLNYTDPHSD LSTEFHLPNF SIPPPPQYGI
HPHYAPRHHQ GYGFANVPSA HATLPMYFDE RLCDNHSRDS ELKQKISKDD LQEKTKSVSE
SHKIVKGLVV KDYKSNHPVP KFVPRQATKN INKPDTTSKV KDTDKFNKEI RKNAFTLGEP
QGPEKPVDLK SQSLDITREA VVSVNSSVKE IRKQVAKFSS DPPLKKKKKI Q
//
