ID V4C4L4_LOTGI Unreviewed; 387 AA.
AC V4C4L4;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 24-JAN-2024, entry version 42.
DE RecName: Full=Ionotropic glutamate receptor C-terminal domain-containing protein {ECO:0008006|Google:ProtNLM};
DE Flags: Fragment;
GN ORFNames=LOTGIDRAFT_115937 {ECO:0000313|EMBL:ESO96489.1};
OS Lottia gigantea (Giant owl limpet).
OC Eukaryota; Metazoa; Spiralia; Lophotrochozoa; Mollusca; Gastropoda;
OC Patellogastropoda; Lottioidea; Lottiidae; Lottia.
OX NCBI_TaxID=225164 {ECO:0000313|EMBL:ESO96489.1, ECO:0000313|Proteomes:UP000030746};
RN [1] {ECO:0000313|EMBL:ESO96489.1, ECO:0000313|Proteomes:UP000030746}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23254933; DOI=10.1038/nature11696;
RA Simakov O., Marletaz F., Cho S.J., Edsinger-Gonzales E., Havlak P.,
RA Hellsten U., Kuo D.H., Larsson T., Lv J., Arendt D., Savage R.,
RA Osoegawa K., de Jong P., Grimwood J., Chapman J.A., Shapiro H., Aerts A.,
RA Otillar R.P., Terry A.Y., Boore J.L., Grigoriev I.V., Lindberg D.R.,
RA Seaver E.C., Weisblat D.A., Putnam N.H., Rokhsar D.S.;
RT "Insights into bilaterian evolution from three spiralian genomes.";
RL Nature 493:526-531(2013).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141}; Multi-
CC pass membrane protein {ECO:0000256|ARBA:ARBA00004141}.
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DR EMBL; KB201459; ESO96489.1; -; Genomic_DNA.
DR RefSeq; XP_009052845.1; XM_009054597.1.
DR AlphaFoldDB; V4C4L4; -.
DR EnsemblMetazoa; LotgiT115937; LotgiP115937; LotgiG115937.
DR GeneID; 20231285; -.
DR KEGG; lgi:LOTGIDRAFT_115937; -.
DR CTD; 20231285; -.
DR HOGENOM; CLU_007257_0_5_1; -.
DR OMA; IKMATEC; -.
DR OrthoDB; 2967760at2759; -.
DR Proteomes; UP000030746; Unassembled WGS sequence.
DR GO; GO:0005886; C:plasma membrane; IEA:UniProtKB-KW.
DR GO; GO:0004970; F:ionotropic glutamate receptor activity; IEA:InterPro.
DR Gene3D; 1.10.287.70; -; 1.
DR Gene3D; 3.40.190.10; Periplasmic binding protein-like II; 1.
DR InterPro; IPR019594; Glu/Gly-bd.
DR InterPro; IPR001320; Iontro_rcpt_C.
DR PANTHER; PTHR42643; IONOTROPIC RECEPTOR 20A-RELATED; 1.
DR PANTHER; PTHR42643:SF13; IONOTROPIC RECEPTOR 31A, ISOFORM C; 1.
DR Pfam; PF00060; Lig_chan; 1.
DR Pfam; PF10613; Lig_chan-Glu_bd; 1.
DR SMART; SM00918; Lig_chan-Glu_bd; 1.
DR SMART; SM00079; PBPe; 1.
DR SUPFAM; SSF53850; Periplasmic binding protein-like II; 1.
DR SUPFAM; SSF81324; Voltage-gated potassium channels; 1.
PE 4: Predicted;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Membrane {ECO:0000256|SAM:Phobius};
KW Reference proteome {ECO:0000313|Proteomes:UP000030746};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius}.
FT TRANSMEM 103..121
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 163..187
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 355..377
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 1..332
FT /note="Ionotropic glutamate receptor C-terminal"
FT /evidence="ECO:0000259|SMART:SM00079"
FT DOMAIN 1..47
FT /note="Ionotropic glutamate receptor L-glutamate and
FT glycine-binding"
FT /evidence="ECO:0000259|SMART:SM00918"
FT NON_TER 1
FT /evidence="ECO:0000313|EMBL:ESO96489.1"
SQ SEQUENCE 387 AA; 44521 MW; 962B172214CB9FCA CRC64;
YSGFCMDLLQ ELASSMNFSF IIVMPEDGQW GVVENGSWTG LVGQIVRREV DLTVAPLVIS
SERLKVMDFS FPFFHDYSTV LYKLPDPNLY KWRKLIDPMK GEVFMCILIS FMIVTITLYV
MEKHNPFYQK FRIHSFQEYV IYVFGAMLTQ GGPNQPRSSS GRLLIACWWL FSIVVVAIYS
GNLIAFLTVT KDQPPFETLA ELSQQDTYKW GTIGGTIWTT FLKTANTPDT KALWAGVVKF
NKTDPVVLSI DVDTHLKKVA NGNYAFLADK AMLEIKMATE CDWVFLKELF YPLQYAVGLP
MKSPYNKLFY DEMLRIYETG LLQIWKKRWW PKKGTCKGSL VTEAKRIELV DLQSAFYVIA
IGIVLASFII VSECFYFKRS FSIQYQT
//