ID V4KPY4_EUTSA Unreviewed; 562 AA.
AC V4KPY4;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 27-MAR-2024, entry version 37.
DE RecName: Full=Zinc finger PHD-type domain-containing protein {ECO:0000259|SMART:SM00249};
GN ORFNames=EUTSA_v10007250mg {ECO:0000313|EMBL:ESQ33384.1};
OS Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema.
OX NCBI_TaxID=72664 {ECO:0000313|EMBL:ESQ33384.1, ECO:0000313|Proteomes:UP000030689};
RN [1] {ECO:0000313|EMBL:ESQ33384.1, ECO:0000313|Proteomes:UP000030689}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23518688; DOI=10.3389/fpls.2013.00046;
RA Yang R., Jarvis D.E., Chen H., Beilstein M.A., Grimwood J., Jenkins J.,
RA Shu S., Prochnik S., Xin M., Ma C., Schmutz J., Wing R.A.,
RA Mitchell-Olds T., Schumaker K.S., Wang X.;
RT "The Reference Genome of the Halophytic Plant Eutrema salsugineum.";
RL Front. Plant Sci. 4:46-46(2013).
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DR EMBL; KI517683; ESQ33384.1; -; Genomic_DNA.
DR RefSeq; XP_006415031.1; XM_006414968.1.
DR AlphaFoldDB; V4KPY4; -.
DR EnsemblPlants; ESQ33384; ESQ33384; EUTSA_v10007250mg.
DR GeneID; 18991650; -.
DR Gramene; ESQ33384; ESQ33384; EUTSA_v10007250mg.
DR KEGG; eus:EUTSA_v10007250mg; -.
DR eggNOG; ENOG502SFKZ; Eukaryota.
DR OMA; DFHPMHS; -.
DR OrthoDB; 682216at2759; -.
DR Proteomes; UP000030689; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR046349; C1-like_sf.
DR InterPro; IPR004146; DC1.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR32410; CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN; 1.
DR PANTHER; PTHR32410:SF181; CYSTEINE_HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN; 1.
DR Pfam; PF03107; C1_2; 5.
DR SMART; SM00249; PHD; 3.
DR SUPFAM; SSF57889; Cysteine-rich domain; 5.
PE 4: Predicted;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000030689};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 99..177
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
FT DOMAIN 213..273
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
FT DOMAIN 354..416
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
SQ SEQUENCE 562 AA; 64642 MW; BE04333BAB5B80F1 CRC64;
MDSIGEFHEV EKDGKLFQVY HHPILQTQSP INSSPGEAAS NNQPHQLFFL CPNIRWQDVY
YNSEFNIVPL EISPECKQGE NEVLPLFFCN NKEFDVNGGC EVCRGSRFGT DYYFCVHCDQ
IYHKECVKSP LKIKHPYHPE HPLQLYYHVH YGRVDVIECL CCARGVSYLV YHCTICQIFM
HPICAMKSVP FVIEKPKRHD HPLTSFPRPA CLTCDVCGLV RKLHPTYVCL RCNFVAHNDC
LSSPRVIKIS RHQHRISYVP CLPSGEWSCG VCRQSVDGNY GAYTCAQCGN YAVHPRCALR
KDVCDGEELE GVEEDDITQD LEPFVMISDG VILHFLHDHP LRLEVNILYD ENKLCQACVM
PIFEEKFYSC MDCDFILHES CTNAPRRMQH ALHPHILTLK AVSRYPNGLY NCDACARDCD
GFIYECPKLE CDYGVDVRCS SLSEPFDFKG HEHPLFLALD PRENPICQVC ESICASQLNC
IKCNFIVCIK CATLPYKAKY KHDKHLLEIL WGDEVCEKDW CELCERNLGD TGTKIFYWCN
DCCTTLHIEC LFGDDPYVKP RQ
//
