ID V4LQ39_EUTSA Unreviewed; 527 AA.
AC V4LQ39;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN ORFNames=EUTSA_v10003181mg {ECO:0000313|EMBL:ESQ44572.1};
OS Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema.
OX NCBI_TaxID=72664 {ECO:0000313|EMBL:ESQ44572.1, ECO:0000313|Proteomes:UP000030689};
RN [1] {ECO:0000313|EMBL:ESQ44572.1, ECO:0000313|Proteomes:UP000030689}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23518688; DOI=10.3389/fpls.2013.00046;
RA Yang R., Jarvis D.E., Chen H., Beilstein M.A., Grimwood J., Jenkins J.,
RA Shu S., Prochnik S., Xin M., Ma C., Schmutz J., Wing R.A.,
RA Mitchell-Olds T., Schumaker K.S., Wang X.;
RT "The Reference Genome of the Halophytic Plant Eutrema salsugineum.";
RL Front. Plant Sci. 4:46-46(2013).
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DR EMBL; KI517441; ESQ44572.1; -; Genomic_DNA.
DR RefSeq; XP_006403119.1; XM_006403056.1.
DR AlphaFoldDB; V4LQ39; -.
DR STRING; 72664.V4LQ39; -.
DR EnsemblPlants; ESQ44572; ESQ44572; EUTSA_v10003181mg.
DR GeneID; 18020622; -.
DR Gramene; ESQ44572; ESQ44572; EUTSA_v10003181mg.
DR KEGG; eus:EUTSA_v10003181mg; -.
DR eggNOG; KOG0311; Eukaryota.
DR OMA; ASRPENC; -.
DR OrthoDB; 460116at2759; -.
DR Proteomes; UP000030689; Unassembled WGS sequence.
DR GO; GO:0035102; C:PRC1 complex; IEA:EnsemblPlants.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0045814; P:negative regulation of gene expression, epigenetic; IEA:EnsemblPlants.
DR GO; GO:0048364; P:root development; IEA:EnsemblPlants.
DR GO; GO:0009845; P:seed germination; IEA:EnsemblPlants.
DR CDD; cd16531; RING-HC_RING1-like; 1.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR044592; RING1A/B.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR InterPro; IPR017907; Znf_RING_CS.
DR PANTHER; PTHR46537:SF1; E3 UBIQUITIN-PROTEIN LIGASE RING1A-RELATED; 1.
DR PANTHER; PTHR46537; OS11G0578200 PROTEIN; 1.
DR Pfam; PF13923; zf-C3HC4_2; 1.
DR SMART; SM00184; RING; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS00518; ZF_RING_1; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000030689};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771, ECO:0000256|PROSITE-
KW ProRule:PRU00175}.
FT DOMAIN 137..177
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
FT REGION 1..122
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 275..353
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT REGION 366..385
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 11..30
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 31..108
FT /note="Acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 320..342
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 371..385
FT /note="Polar residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 527 AA; 59829 MW; 64D4CF7B5DCACC74 CRC64;
MPVKTSFSAA EIPDEEVEDK DQPRDRFNPE AEENEEEDLE EKVEKKDEEE EGDDAEVKRD
EADEEEEAEE ADEDEEEDEA DGEEEEDDVE DEDAEEEQEE EEEEEEDSKE KSSSPNSGEQ
SEFMDIDLGE IRKDVQCPIC LGIIKKTRTV MECLHRFCRE CIDKSMRLGN NECPACRKHC
ASRRSLRDDP KFDALIAALF TNIDSYEEEE LAFHEDDKAR NKQIQASIAE ISQRQSEALV
KRRSFGKEAA VLMRSQRSAS GSRRRRNCRN MEQNALETHE DDNNDDNNNN GGGGGKDSSS
DERGAEVRQR KRRKRSTIRS TQHPSSSGAN NNNNNGNCAD NDTEVYRDSK GISPGLEWNP
EILAWGRGGT RSNTRHGNNT PGGSVKSLRN ARVNKLVEYL RSNVDGNSLE LDIHLKLVSL
DTNCVPDLPQ PYLRCRPTLL VKQLREFVAL QMHLKSEEVE LLGTRRLGGE DKEIENLPVV
TSASAAVASK DEMQSLEDNE TLSRLKVDFF SSHEQHLIIA YRQKQTE
//