ID V4NIU6_EUTSA Unreviewed; 643 AA.
AC V4NIU6;
DT 22-JAN-2014, integrated into UniProtKB/TrEMBL.
DT 22-JAN-2014, sequence version 1.
DT 03-MAY-2023, entry version 35.
DE RecName: Full=Zinc finger PHD-type domain-containing protein {ECO:0000259|SMART:SM00249};
GN ORFNames=EUTSA_v10000668mg {ECO:0000313|EMBL:ESQ46186.1};
OS Eutrema salsugineum (Saltwater cress) (Sisymbrium salsugineum).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; malvids; Brassicales; Brassicaceae; Eutremeae; Eutrema.
OX NCBI_TaxID=72664 {ECO:0000313|EMBL:ESQ46186.1, ECO:0000313|Proteomes:UP000030689};
RN [1] {ECO:0000313|EMBL:ESQ46186.1, ECO:0000313|Proteomes:UP000030689}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=23518688; DOI=10.3389/fpls.2013.00046;
RA Yang R., Jarvis D.E., Chen H., Beilstein M.A., Grimwood J., Jenkins J.,
RA Shu S., Prochnik S., Xin M., Ma C., Schmutz J., Wing R.A.,
RA Mitchell-Olds T., Schumaker K.S., Wang X.;
RT "The Reference Genome of the Halophytic Plant Eutrema salsugineum.";
RL Front. Plant Sci. 4:46-46(2013).
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DR EMBL; KI517426; ESQ46186.1; -; Genomic_DNA.
DR RefSeq; XP_006404733.1; XM_006404670.1.
DR AlphaFoldDB; V4NIU6; -.
DR EnsemblPlants; ESQ46186; ESQ46186; EUTSA_v10000668mg.
DR Gramene; ESQ46186; ESQ46186; EUTSA_v10000668mg.
DR KEGG; eus:EUTSA_v10000668mg; -.
DR eggNOG; ENOG502SFKZ; Eukaryota.
DR OMA; DENIICQ; -.
DR Proteomes; UP000030689; Unassembled WGS sequence.
DR GO; GO:0046872; F:metal ion binding; IEA:UniProtKB-KW.
DR GO; GO:0006281; P:DNA repair; IEA:UniProtKB-KW.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR046349; C1-like_sf.
DR InterPro; IPR004146; DC1.
DR InterPro; IPR001965; Znf_PHD.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR32410:SF153; CHP-RICH ZINC FINGER PROTEIN-LIKE-RELATED; 1.
DR PANTHER; PTHR32410; CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN; 1.
DR Pfam; PF03107; C1_2; 5.
DR SMART; SM00249; PHD; 4.
DR SUPFAM; SSF57889; Cysteine-rich domain; 4.
PE 4: Predicted;
KW DNA damage {ECO:0000256|ARBA:ARBA00022763};
KW DNA repair {ECO:0000256|ARBA:ARBA00023204};
KW Metal-binding {ECO:0000256|ARBA:ARBA00022723};
KW Reference proteome {ECO:0000313|Proteomes:UP000030689};
KW Zinc {ECO:0000256|ARBA:ARBA00022833};
KW Zinc-finger {ECO:0000256|ARBA:ARBA00022771}.
FT DOMAIN 115..178
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
FT DOMAIN 228..289
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
FT DOMAIN 369..435
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
FT DOMAIN 541..608
FT /note="Zinc finger PHD-type"
FT /evidence="ECO:0000259|SMART:SM00249"
SQ SEQUENCE 643 AA; 74851 MW; F5296F0739A08555 CRC64;
MSSVGVFREE EIDGKTFYIY SGESSINSGD LDLPPLQPLF LCPFLRYKAH NEKNPHDEFL
LYKISPHFHN TDEQVQQHLP DSDCNDSNCD DDICKLPVVP IFWCNDKQPD YDQFRCSACL
DSKLGTDYYI CLTCDDMFHK ECVESPLEIK HPSYPFLSLQ LYIYSRASSS QLFCLCCKEN
LFGILYHCPT YKLSMHPVCA MKPIPIFIDH PKSHPHQLTL FAKQDSLLCN VCGLIEKSVP
TYVCNRCVFV VHQYCIYIPY VIKLWFRHHH RISFSPSRPS GKWSCRVCYE KVDNSCGGYC
CDKCSDYFVH TKCALRSDVW DGVDLEGVPE EPEIIVEPYE TIADGIILHF SHGHHLKLEI
SIVYDEDRFC QACILPIYEG NYYSCMDGCN FVLHEACVNA PCKIHHALHP RPLTLKVSSD
EQEFSKGFFK CDACYRESCG FVYEVGGCSL DMRCALVSEP FDYEGHEHPL FLTLDREEEE
RKATCQICQE QHSSLRKLNC IECDYVICFR CVTLPYRAKY EYDKHFLTFQ NGKDGRDQLD
WCDVCERKIS SKDGFYECHD CCITLHVHCL LGREPYMQKP GQTIMFENKE FHILPNNIES
QPFCYNHDQL DHDEDRFPHK VVFEWEDKTY CSFLCMIGSL QWS
//
