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Database: UniProt
Entry: V5LKQ8_9TOMB
LinkDB: V5LKQ8_9TOMB
Original site: V5LKQ8_9TOMB 
ID   V5LKQ8_9TOMB            Unreviewed;       390 AA.
AC   V5LKQ8;
DT   19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT   19-FEB-2014, sequence version 1.
DT   08-NOV-2023, entry version 39.
DE   RecName: Full=Capsid protein {ECO:0000256|ARBA:ARBA00018091};
OS   Yam spherical virus.
OC   Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC   Tolivirales; Tombusviridae; Procedovirinae; Aureusvirus;
OC   Aureusvirus dioscoreae.
OX   NCBI_TaxID=1421055 {ECO:0000313|EMBL:AHA53611.1, ECO:0000313|Proteomes:UP000202630};
RN   [1] {ECO:0000313|EMBL:AHA53611.1, ECO:0000313|Proteomes:UP000202630}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX   PubMed=24085328; DOI=10.1007/s00705-013-1845-x;
RA   Menzel W., Thottappilly G., Winter S.;
RT   "Characterization of an isometric virus isolated from yam (Dioscorea
RT   rotundata) in Nigeria suggests that it belongs to a new species in the
RT   genus Aureusvirus.";
RL   Arch. Virol. 159:603-606(2014).
CC   -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC       {ECO:0000256|ARBA:ARBA00007446}.
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DR   EMBL; KF482072; AHA53611.1; -; Genomic_RNA.
DR   RefSeq; YP_008828158.1; NC_022895.1.
DR   GeneID; 17699077; -.
DR   KEGG; vg:17699077; -.
DR   OrthoDB; 10131at10239; -.
DR   Proteomes; UP000202630; Genome.
DR   GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR   GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR   Gene3D; 2.60.120.20; -; 1.
DR   InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR   InterPro; IPR029053; Viral_coat.
DR   Pfam; PF00729; Viral_coat; 1.
DR   PRINTS; PR00233; ICOSAHEDRAL.
DR   SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
PE   3: Inferred from homology;
KW   Capsid protein {ECO:0000313|EMBL:AHA53611.1};
KW   T=3 icosahedral capsid protein {ECO:0000256|ARBA:ARBA00023060};
KW   Virion {ECO:0000256|ARBA:ARBA00023060}.
FT   DOMAIN          75..266
FT                   /note="Icosahedral viral capsid protein S"
FT                   /evidence="ECO:0000259|Pfam:PF00729"
SQ   SEQUENCE   390 AA;  42179 MW;  DDDC410D0251C46D CRC64;
     MAMIVANNNK AMANIKKAGK GMVLAIGTQM IAANGKRLFW DGVSWVTRKI YNKLAGGVRQ
     NGALVSHPGV LPGGVAAPVA ISRTIRGSKP KFIRSKGSVT VSHREYVSQV QGNATGFFRL
     NHDGANDLYR INPLNSAVTP WLVNIASNFD QYRFTRLQLH YVPFCATTQV GRFAMFFDKD
     SEDVGPFDRA ELANFAHLCE TNVWAEGTLN IPVDNVKRFN NDTTVVDPKL IDLGRLGIVT
     YSTNTNDFIG DVFISYTVEL FEAQPTADLM GEIVGSGATV ISSRGMNWFT QLPGTSSNTT
     ASFIFKPGTY YVHFICDGAL IVNPIVAVVG GGAVLNNKVV FTATEASISA TIDISQPSNR
     VDFNFAGGTF SVWDCFATKV SRSLAITTGT
//
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