ID V5LKQ8_9TOMB Unreviewed; 390 AA.
AC V5LKQ8;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 08-NOV-2023, entry version 39.
DE RecName: Full=Capsid protein {ECO:0000256|ARBA:ARBA00018091};
OS Yam spherical virus.
OC Viruses; Riboviria; Orthornavirae; Kitrinoviricota; Tolucaviricetes;
OC Tolivirales; Tombusviridae; Procedovirinae; Aureusvirus;
OC Aureusvirus dioscoreae.
OX NCBI_TaxID=1421055 {ECO:0000313|EMBL:AHA53611.1, ECO:0000313|Proteomes:UP000202630};
RN [1] {ECO:0000313|EMBL:AHA53611.1, ECO:0000313|Proteomes:UP000202630}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RX PubMed=24085328; DOI=10.1007/s00705-013-1845-x;
RA Menzel W., Thottappilly G., Winter S.;
RT "Characterization of an isometric virus isolated from yam (Dioscorea
RT rotundata) in Nigeria suggests that it belongs to a new species in the
RT genus Aureusvirus.";
RL Arch. Virol. 159:603-606(2014).
CC -!- SIMILARITY: Belongs to the icosahedral plant coat protein family.
CC {ECO:0000256|ARBA:ARBA00007446}.
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DR EMBL; KF482072; AHA53611.1; -; Genomic_RNA.
DR RefSeq; YP_008828158.1; NC_022895.1.
DR GeneID; 17699077; -.
DR KEGG; vg:17699077; -.
DR OrthoDB; 10131at10239; -.
DR Proteomes; UP000202630; Genome.
DR GO; GO:0039617; C:T=3 icosahedral viral capsid; IEA:UniProtKB-KW.
DR GO; GO:0005198; F:structural molecule activity; IEA:InterPro.
DR Gene3D; 2.60.120.20; -; 1.
DR InterPro; IPR000937; Capsid_prot_S-dom_vir.
DR InterPro; IPR029053; Viral_coat.
DR Pfam; PF00729; Viral_coat; 1.
DR PRINTS; PR00233; ICOSAHEDRAL.
DR SUPFAM; SSF88633; Positive stranded ssRNA viruses; 1.
PE 3: Inferred from homology;
KW Capsid protein {ECO:0000313|EMBL:AHA53611.1};
KW T=3 icosahedral capsid protein {ECO:0000256|ARBA:ARBA00023060};
KW Virion {ECO:0000256|ARBA:ARBA00023060}.
FT DOMAIN 75..266
FT /note="Icosahedral viral capsid protein S"
FT /evidence="ECO:0000259|Pfam:PF00729"
SQ SEQUENCE 390 AA; 42179 MW; DDDC410D0251C46D CRC64;
MAMIVANNNK AMANIKKAGK GMVLAIGTQM IAANGKRLFW DGVSWVTRKI YNKLAGGVRQ
NGALVSHPGV LPGGVAAPVA ISRTIRGSKP KFIRSKGSVT VSHREYVSQV QGNATGFFRL
NHDGANDLYR INPLNSAVTP WLVNIASNFD QYRFTRLQLH YVPFCATTQV GRFAMFFDKD
SEDVGPFDRA ELANFAHLCE TNVWAEGTLN IPVDNVKRFN NDTTVVDPKL IDLGRLGIVT
YSTNTNDFIG DVFISYTVEL FEAQPTADLM GEIVGSGATV ISSRGMNWFT QLPGTSSNTT
ASFIFKPGTY YVHFICDGAL IVNPIVAVVG GGAVLNNKVV FTATEASISA TIDISQPSNR
VDFNFAGGTF SVWDCFATKV SRSLAITTGT
//