ID V6DKJ8_9LACO Unreviewed; 307 AA.
AC V6DKJ8;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 24-JAN-2024, entry version 33.
DE SubName: Full=60 kDa inner membrane protein {ECO:0000313|EMBL:CDK34549.1};
GN Name=yidC {ECO:0000313|EMBL:CDK34549.1};
GN ORFNames=LSCP400_03481 {ECO:0000313|EMBL:CDK34549.1};
OS Ligilactobacillus salivarius cp400.
OC Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC Ligilactobacillus.
OX NCBI_TaxID=1273133 {ECO:0000313|EMBL:CDK34549.1, ECO:0000313|Proteomes:UP000018601};
RN [1] {ECO:0000313|EMBL:CDK34549.1, ECO:0000313|Proteomes:UP000018601}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cp400 {ECO:0000313|Proteomes:UP000018601};
RX PubMed=24526652; DOI=10.1128/genomeA.01231-13;
RA Mackenzie D.A., McLay K., Roos S., Walter J., Swarbreck D., Drou N.,
RA Crossman L.C., Juge N.;
RT "Draft Genome Sequence of a Novel Lactobacillus salivarius Strain Isolated
RT from Piglet.";
RL Genome Announc. 2:e01231-e01213(2014).
CC -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141,
CC ECO:0000256|RuleBase:RU003945}; Multi-pass membrane protein
CC {ECO:0000256|ARBA:ARBA00004141, ECO:0000256|RuleBase:RU003945}.
CC -!- SIMILARITY: Belongs to the OXA1/ALB3/YidC family.
CC {ECO:0000256|RuleBase:RU003945}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:CDK34549.1}.
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DR EMBL; CBVR010000004; CDK34549.1; -; Genomic_DNA.
DR AlphaFoldDB; V6DKJ8; -.
DR Proteomes; UP000018601; Unassembled WGS sequence.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR GO; GO:0032977; F:membrane insertase activity; IEA:InterPro.
DR GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR CDD; cd20070; 5TM_YidC_Alb3; 1.
DR InterPro; IPR001708; YidC/ALB3/OXA1/COX18.
DR InterPro; IPR028055; YidC/Oxa/ALB_C.
DR InterPro; IPR047196; YidC_ALB_C.
DR NCBIfam; TIGR03592; yidC_oxa1_cterm; 1.
DR PANTHER; PTHR12428:SF65; CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX18, MITOCHONDRIAL; 1.
DR PANTHER; PTHR12428; OXA1; 1.
DR Pfam; PF02096; 60KD_IMP; 1.
DR PRINTS; PR00701; 60KDINNERMP.
DR PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE 3: Inferred from homology;
KW Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW Transmembrane {ECO:0000256|ARBA:ARBA00022692,
KW ECO:0000256|RuleBase:RU003945};
KW Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW ECO:0000256|SAM:Phobius}; Transport {ECO:0000256|ARBA:ARBA00022448}.
FT TRANSMEM 50..74
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 131..156
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 176..196
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 208..224
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 230..249
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 59..247
FT /note="Membrane insertase YidC/Oxa/ALB C-terminal"
FT /evidence="ECO:0000259|Pfam:PF02096"
FT REGION 270..307
FT /note="Disordered"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
FT COMPBIAS 270..297
FT /note="Basic and acidic residues"
FT /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ SEQUENCE 307 AA; 34752 MW; CC88B9BDD2F6E057 CRC64;
MNKNKKYILL PSFLTIALLL SGCVQRTKDG KPYGFIYEKL AIPTQHLLEW LSGVLGGSYG
WSIIVITFIV RLIMMPIMIN QSKKATIQQE KIAMIRPQLA KIQEQQKNAK TPEERNAASQ
AMMKLYQENN ISMVGGIGCL PLLIQMPIFA ALYAAIQYSP ELSKTTFMGI NLGHRSFTFV
VLTFVIYALQ GWLSTLGLPE EQKKQMQSMI IVSPVMLTGM TYISPAGLGL YFFIGGIFAC
IQTLIINFMR PRIRKDIKKE LKNKPIKEVT VESPVKKTDD EKKVTSVSKD MHEKNRKRNA
GKQNRKK
//