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Database: UniProt
Entry: V6DKJ8_9LACO
LinkDB: V6DKJ8_9LACO
Original site: V6DKJ8_9LACO 
ID   V6DKJ8_9LACO            Unreviewed;       307 AA.
AC   V6DKJ8;
DT   19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT   19-FEB-2014, sequence version 1.
DT   24-JAN-2024, entry version 33.
DE   SubName: Full=60 kDa inner membrane protein {ECO:0000313|EMBL:CDK34549.1};
GN   Name=yidC {ECO:0000313|EMBL:CDK34549.1};
GN   ORFNames=LSCP400_03481 {ECO:0000313|EMBL:CDK34549.1};
OS   Ligilactobacillus salivarius cp400.
OC   Bacteria; Bacillota; Bacilli; Lactobacillales; Lactobacillaceae;
OC   Ligilactobacillus.
OX   NCBI_TaxID=1273133 {ECO:0000313|EMBL:CDK34549.1, ECO:0000313|Proteomes:UP000018601};
RN   [1] {ECO:0000313|EMBL:CDK34549.1, ECO:0000313|Proteomes:UP000018601}
RP   NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC   STRAIN=cp400 {ECO:0000313|Proteomes:UP000018601};
RX   PubMed=24526652; DOI=10.1128/genomeA.01231-13;
RA   Mackenzie D.A., McLay K., Roos S., Walter J., Swarbreck D., Drou N.,
RA   Crossman L.C., Juge N.;
RT   "Draft Genome Sequence of a Novel Lactobacillus salivarius Strain Isolated
RT   from Piglet.";
RL   Genome Announc. 2:e01231-e01213(2014).
CC   -!- SUBCELLULAR LOCATION: Membrane {ECO:0000256|ARBA:ARBA00004141,
CC       ECO:0000256|RuleBase:RU003945}; Multi-pass membrane protein
CC       {ECO:0000256|ARBA:ARBA00004141, ECO:0000256|RuleBase:RU003945}.
CC   -!- SIMILARITY: Belongs to the OXA1/ALB3/YidC family.
CC       {ECO:0000256|RuleBase:RU003945}.
CC   -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC       whole genome shotgun (WGS) entry which is preliminary data.
CC       {ECO:0000313|EMBL:CDK34549.1}.
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DR   EMBL; CBVR010000004; CDK34549.1; -; Genomic_DNA.
DR   AlphaFoldDB; V6DKJ8; -.
DR   Proteomes; UP000018601; Unassembled WGS sequence.
DR   GO; GO:0016020; C:membrane; IEA:UniProtKB-SubCell.
DR   GO; GO:0032977; F:membrane insertase activity; IEA:InterPro.
DR   GO; GO:0015031; P:protein transport; IEA:UniProtKB-KW.
DR   CDD; cd20070; 5TM_YidC_Alb3; 1.
DR   InterPro; IPR001708; YidC/ALB3/OXA1/COX18.
DR   InterPro; IPR028055; YidC/Oxa/ALB_C.
DR   InterPro; IPR047196; YidC_ALB_C.
DR   NCBIfam; TIGR03592; yidC_oxa1_cterm; 1.
DR   PANTHER; PTHR12428:SF65; CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX18, MITOCHONDRIAL; 1.
DR   PANTHER; PTHR12428; OXA1; 1.
DR   Pfam; PF02096; 60KD_IMP; 1.
DR   PRINTS; PR00701; 60KDINNERMP.
DR   PROSITE; PS51257; PROKAR_LIPOPROTEIN; 1.
PE   3: Inferred from homology;
KW   Cell membrane {ECO:0000256|ARBA:ARBA00022475};
KW   Membrane {ECO:0000256|ARBA:ARBA00023136, ECO:0000256|SAM:Phobius};
KW   Protein transport {ECO:0000256|ARBA:ARBA00022927};
KW   Transmembrane {ECO:0000256|ARBA:ARBA00022692,
KW   ECO:0000256|RuleBase:RU003945};
KW   Transmembrane helix {ECO:0000256|ARBA:ARBA00022989,
KW   ECO:0000256|SAM:Phobius}; Transport {ECO:0000256|ARBA:ARBA00022448}.
FT   TRANSMEM        50..74
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        131..156
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        176..196
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        208..224
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   TRANSMEM        230..249
FT                   /note="Helical"
FT                   /evidence="ECO:0000256|SAM:Phobius"
FT   DOMAIN          59..247
FT                   /note="Membrane insertase YidC/Oxa/ALB C-terminal"
FT                   /evidence="ECO:0000259|Pfam:PF02096"
FT   REGION          270..307
FT                   /note="Disordered"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
FT   COMPBIAS        270..297
FT                   /note="Basic and acidic residues"
FT                   /evidence="ECO:0000256|SAM:MobiDB-lite"
SQ   SEQUENCE   307 AA;  34752 MW;  CC88B9BDD2F6E057 CRC64;
     MNKNKKYILL PSFLTIALLL SGCVQRTKDG KPYGFIYEKL AIPTQHLLEW LSGVLGGSYG
     WSIIVITFIV RLIMMPIMIN QSKKATIQQE KIAMIRPQLA KIQEQQKNAK TPEERNAASQ
     AMMKLYQENN ISMVGGIGCL PLLIQMPIFA ALYAAIQYSP ELSKTTFMGI NLGHRSFTFV
     VLTFVIYALQ GWLSTLGLPE EQKKQMQSMI IVSPVMLTGM TYISPAGLGL YFFIGGIFAC
     IQTLIINFMR PRIRKDIKKE LKNKPIKEVT VESPVKKTDD EKKVTSVSKD MHEKNRKRNA
     GKQNRKK
//
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