ID V6SJ26_9FLAO Unreviewed; 428 AA.
AC V6SJ26;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 27-MAR-2024, entry version 31.
DE SubName: Full=Deoxyribodipyrimidine photolyase-class I {ECO:0000313|EMBL:ESU26663.1};
DE EC=4.1.99.3 {ECO:0000313|EMBL:ESU26663.1};
GN ORFNames=FLJC2902T_26380 {ECO:0000313|EMBL:ESU26663.1};
OS Flavobacterium limnosediminis JC2902.
OC Bacteria; Bacteroidota; Flavobacteriia; Flavobacteriales;
OC Flavobacteriaceae; Flavobacterium.
OX NCBI_TaxID=1341181 {ECO:0000313|EMBL:ESU26663.1, ECO:0000313|Proteomes:UP000018004};
RN [1] {ECO:0000313|EMBL:ESU26663.1, ECO:0000313|Proteomes:UP000018004}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=JC2902 {ECO:0000313|EMBL:ESU26663.1,
RC ECO:0000313|Proteomes:UP000018004};
RA Lee K., Yi H., Park S., Chun J.;
RT "Flavobacterium limnosediminis JC2902 genome sequencing.";
RL Submitted (AUG-2013) to the EMBL/GenBank/DDBJ databases.
CC -!- COFACTOR:
CC Name=FAD; Xref=ChEBI:CHEBI:57692;
CC Evidence={ECO:0000256|PIRSR:PIRSR602081-1};
CC Note=Binds 1 FAD per subunit. {ECO:0000256|PIRSR:PIRSR602081-1};
CC -!- SIMILARITY: Belongs to the DNA photolyase family.
CC {ECO:0000256|RuleBase:RU004182}.
CC -!- CAUTION: The sequence shown here is derived from an EMBL/GenBank/DDBJ
CC whole genome shotgun (WGS) entry which is preliminary data.
CC {ECO:0000313|EMBL:ESU26663.1}.
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DR EMBL; AVGG01000018; ESU26663.1; -; Genomic_DNA.
DR RefSeq; WP_023580196.1; NZ_AVGG01000018.1.
DR AlphaFoldDB; V6SJ26; -.
DR STRING; 1341181.FLJC2902T_26380; -.
DR PATRIC; fig|1341181.4.peg.2597; -.
DR eggNOG; COG0415; Bacteria.
DR OrthoDB; 9772484at2; -.
DR Proteomes; UP000018004; Unassembled WGS sequence.
DR GO; GO:0003904; F:deoxyribodipyrimidine photo-lyase activity; IEA:UniProtKB-EC.
DR GO; GO:0097159; F:organic cyclic compound binding; IEA:UniProt.
DR GO; GO:0051716; P:cellular response to stimulus; IEA:UniProt.
DR GO; GO:0006139; P:nucleobase-containing compound metabolic process; IEA:UniProt.
DR GO; GO:0006950; P:response to stress; IEA:UniProt.
DR Gene3D; 1.25.40.80; -; 1.
DR Gene3D; 1.10.579.10; DNA Cyclobutane Dipyrimidine Photolyase, subunit A, domain 3; 1.
DR Gene3D; 3.40.50.620; HUPs; 1.
DR InterPro; IPR036134; Crypto/Photolyase_FAD-like_sf.
DR InterPro; IPR036155; Crypto/Photolyase_N_sf.
DR InterPro; IPR005101; Cryptochr/Photolyase_FAD-bd.
DR InterPro; IPR002081; Cryptochrome/DNA_photolyase_1.
DR InterPro; IPR018394; DNA_photolyase_1_CS_C.
DR InterPro; IPR006050; DNA_photolyase_N.
DR InterPro; IPR014729; Rossmann-like_a/b/a_fold.
DR PANTHER; PTHR11455; CRYPTOCHROME; 1.
DR PANTHER; PTHR11455:SF9; CRYPTOCHROME-1; 1.
DR Pfam; PF00875; DNA_photolyase; 1.
DR Pfam; PF03441; FAD_binding_7; 1.
DR PRINTS; PR00147; DNAPHOTLYASE.
DR SUPFAM; SSF48173; Cryptochrome/photolyase FAD-binding domain; 1.
DR SUPFAM; SSF52425; Cryptochrome/photolyase, N-terminal domain; 1.
DR PROSITE; PS00691; DNA_PHOTOLYASES_1_2; 1.
DR PROSITE; PS51645; PHR_CRY_ALPHA_BETA; 1.
PE 3: Inferred from homology;
KW Chromophore {ECO:0000256|ARBA:ARBA00022991, ECO:0000256|RuleBase:RU004182};
KW FAD {ECO:0000256|ARBA:ARBA00022827, ECO:0000256|PIRSR:PIRSR602081-1};
KW Flavoprotein {ECO:0000256|ARBA:ARBA00022630, ECO:0000256|PIRSR:PIRSR602081-
KW 1}; Lyase {ECO:0000313|EMBL:ESU26663.1}.
FT DOMAIN 1..129
FT /note="Photolyase/cryptochrome alpha/beta"
FT /evidence="ECO:0000259|PROSITE:PS51645"
FT BINDING 209
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000256|PIRSR:PIRSR602081-1"
FT BINDING 250
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000256|PIRSR:PIRSR602081-1"
FT BINDING 253..260
FT /ligand="FAD"
FT /ligand_id="ChEBI:CHEBI:57692"
FT /evidence="ECO:0000256|PIRSR:PIRSR602081-1"
FT SITE 284
FT /note="Electron transfer via tryptophanyl radical"
FT /evidence="ECO:0000256|PIRSR:PIRSR602081-2"
FT SITE 337
FT /note="Electron transfer via tryptophanyl radical"
FT /evidence="ECO:0000256|PIRSR:PIRSR602081-2"
FT SITE 360
FT /note="Electron transfer via tryptophanyl radical"
FT /evidence="ECO:0000256|PIRSR:PIRSR602081-2"
SQ SEQUENCE 428 AA; 50648 MW; D8F5E3994916FE09 CRC64;
MTIFWFRRDL RLDDNTALFH ALNSNEKVLP IFIFDENILS QLPKDDARIT FIHKQLEKIQ
KQLKVIGKSL AIFHGTPEDV FKKLISENKI TTVFTNHDYE PYARKRDKAM NELFKEHAVE
FKTCKDQVLF EKSEVVKDNG SPYVVYTPYS KKWKENFRKM KLVHYPSETL LEKITAHSYP
FLSLKDIGFE KSPIEPKPFD ISKQLIANYE ETRNFPAISG TSLLGVYLRF GTISIRKLIS
LAKESRNETF LNELIWREFF MQILWHFPHT VNRSFREKYY AIQWSNDETL FQKWCEGKTG
YPFVDAGMRE LNATGHMHNR VRMIVASFLC KHLLIDWRWG ETYFAQKLLD YEQSSNVGNW
QWAAGSGVDA APYFRIFNPT EQIKKFDKDL KYIKKWIPEL ETSKYPKPIV DHKEAREKCL
RIYKEAVG
//
