ID V7BDZ1_PHAVU Unreviewed; 469 AA.
AC V7BDZ1;
DT 19-FEB-2014, integrated into UniProtKB/TrEMBL.
DT 19-FEB-2014, sequence version 1.
DT 24-JAN-2024, entry version 29.
DE RecName: Full=RING-type domain-containing protein {ECO:0000259|PROSITE:PS50089};
GN ORFNames=PHAVU_007G102000g {ECO:0000313|EMBL:ESW15785.1};
OS Phaseolus vulgaris (Kidney bean) (French bean).
OC Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
OC Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae;
OC rosids; fabids; Fabales; Fabaceae; Papilionoideae; 50 kb inversion clade;
OC NPAAA clade; indigoferoid/millettioid clade; Phaseoleae; Phaseolus.
OX NCBI_TaxID=3885 {ECO:0000313|EMBL:ESW15785.1, ECO:0000313|Proteomes:UP000000226};
RN [1] {ECO:0000313|Proteomes:UP000000226}
RP NUCLEOTIDE SEQUENCE [LARGE SCALE GENOMIC DNA].
RC STRAIN=cv. G19833 {ECO:0000313|Proteomes:UP000000226};
RX PubMed=24908249; DOI=10.1038/ng.3008;
RA Schmutz J., McClean P.E., Mamidi S., Wu G.A., Cannon S.B., Grimwood J.,
RA Jenkins J., Shu S., Song Q., Chavarro C., Torres-Torres M., Geffroy V.,
RA Moghaddam S.M., Gao D., Abernathy B., Barry K., Blair M., Brick M.A.,
RA Chovatia M., Gepts P., Goodstein D.M., Gonzales M., Hellsten U.,
RA Hyten D.L., Jia G., Kelly J.D., Kudrna D., Lee R., Richard M.M.,
RA Miklas P.N., Osorno J.M., Rodrigues J., Thareau V., Urrea C.A., Wang M.,
RA Yu Y., Zhang M., Wing R.A., Cregan P.B., Rokhsar D.S., Jackson S.A.;
RT "A reference genome for common bean and genome-wide analysis of dual
RT domestications.";
RL Nat. Genet. 46:707-713(2014).
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DR EMBL; CM002294; ESW15785.1; -; Genomic_DNA.
DR RefSeq; XP_007143791.1; XM_007143729.1.
DR AlphaFoldDB; V7BDZ1; -.
DR STRING; 3885.V7BDZ1; -.
DR EnsemblPlants; ESW15785; ESW15785; PHAVU_007G102000g.
DR GeneID; 18625451; -.
DR Gramene; ESW15785; ESW15785; PHAVU_007G102000g.
DR KEGG; pvu:PHAVU_007G102000g; -.
DR eggNOG; KOG1100; Eukaryota.
DR OrthoDB; 451199at2759; -.
DR PhylomeDB; V7BDZ1; -.
DR Proteomes; UP000000226; Chromosome 7.
DR GO; GO:0016020; C:membrane; IEA:UniProtKB-KW.
DR Gene3D; 3.30.40.10; Zinc/RING finger domain, C3HC4 (zinc finger); 1.
DR InterPro; IPR019396; TM_Fragile-X-F-assoc.
DR InterPro; IPR001841; Znf_RING.
DR InterPro; IPR013083; Znf_RING/FYVE/PHD.
DR PANTHER; PTHR46859; TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN; 1.
DR PANTHER; PTHR46859:SF6; TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN; 1.
DR Pfam; PF10269; Tmemb_185A; 1.
DR Pfam; PF13920; zf-C3HC4_3; 1.
DR SUPFAM; SSF57850; RING/U-box; 1.
DR PROSITE; PS50089; ZF_RING_2; 1.
PE 4: Predicted;
KW Membrane {ECO:0000256|SAM:Phobius};
KW Metal-binding {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Reference proteome {ECO:0000313|Proteomes:UP000000226};
KW Transmembrane {ECO:0000256|SAM:Phobius};
KW Transmembrane helix {ECO:0000256|SAM:Phobius};
KW Zinc {ECO:0000256|PROSITE-ProRule:PRU00175};
KW Zinc-finger {ECO:0000256|PROSITE-ProRule:PRU00175}.
FT TRANSMEM 80..103
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 109..126
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 155..175
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 181..202
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 255..275
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT TRANSMEM 287..310
FT /note="Helical"
FT /evidence="ECO:0000256|SAM:Phobius"
FT DOMAIN 422..457
FT /note="RING-type"
FT /evidence="ECO:0000259|PROSITE:PS50089"
SQ SEQUENCE 469 AA; 53899 MW; C950049B3EF4C8F2 CRC64;
MLVRRRVMSW RRVAKALQAL VAHALLFSFT LLLALKLDCL LPDSWTWWKV FSPLWLFHAV
VARGRFSLPA PSIPHDRRWA PFHSLVATPL LVAFELLLCI HLGSNYVMNL RIVFMPLIFF
ETVVLFDNIR MCRALMPGDD ENLTDEAVWE TLPHFWISIS MVFLIAATVF TLLKICGDVA
ALGWWDLFIN YGIAQCFAFL VCTKWHNPTI HGGCHITEPC SSSNTIRYLD MSRGGLVIYT
DEDRQQNGFC NLQDIGGHIM KIPFIGFQIL LFMHLEGTPS SAKNLRHWVI FSPLFLLQGA
GVLFAAYRLI EKIVLLLYSG DIPERYSAIA SKSRECFGFF RHGSRLLGWW SIDEGSKEEE
ARLFFSGSSG YNTFTPDTVK KMPRADLVEE IWRLQAALGE QTEVTKFSQE EYERLQHEKI
LCRICFEEQI NVVLLPCRHH IICSTCCEKC KRCPVCRGTI EERMPVYDV
//